Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 HMGB1P14-201ENST00000557424 591 ntBASIC2.92□□□□□ -1.94
CCDC148Q8NFR7 AC007998.5-201ENST00000622938 237 ntBASIC2.92□□□□□ -1.94
CCDC148Q8NFR7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC148Q8NFR7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 U6.112-201ENST00000384129 70 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 RNU6-198P-201ENST00000384258 104 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 MIR27B-201ENST00000385129 97 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 RNU6-882P-201ENST00000391025 103 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 RNU6-1197P-201ENST00000391183 107 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AL355615.1-201ENST00000406187 641 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AL133264.1-201ENST00000407157 562 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AL136133.1-201ENST00000413694 376 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AL121871.1-201ENST00000443413 436 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 SEPT14P24-201ENST00000447236 180 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 PNPLA4P1-201ENST00000458328 305 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 OR5BM1P-201ENST00000512021 366 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AC090136.1-201ENST00000520009 240 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AC006518.2-201ENST00000542513 940 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AC103810.1-201ENST00000579873 453 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 MIR3162-201ENST00000581818 82 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AC024560.3-201ENST00000608482 349 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 VN1R74P-201ENST00000613259 503 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AC025588.4-201ENST00000615802 908 ntBASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC148Q8NFR7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.9□□□□□ -1.94
CCDC148Q8NFR7 MAPK10-266ENST00000641066 6555 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 RNU1-105P-201ENST00000363470 161 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 ARF4P3-201ENST00000397387 509 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 RPS4XP8-201ENST00000402039 771 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 RAC1P8-201ENST00000427086 527 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 ARPC3P1-201ENST00000437218 533 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 MTND4P15-201ENST00000437913 1033 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AL158053.1-201ENST00000441503 453 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 RPS15AP34-201ENST00000487776 387 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 CKS1BP7-201ENST00000522230 235 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 OR5AK1P-201ENST00000524837 922 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 MIR3921-201ENST00000577308 85 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AL160237.3-201ENST00000604114 1013 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AP003973.1-201ENST00000604639 691 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AP000254.1-201ENST00000609934 520 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AL163152.1-201ENST00000642001 374 ntBASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
CCDC148Q8NFR7 AC135776.4-201ENST00000624300 1904 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 DEFB108F-201ENST00000344638 222 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 MIR6073-201ENST00000352083 89 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 MIR217-201ENST00000384817 110 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AL035405.1-201ENST00000400795 710 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 Z93242.1-201ENST00000427102 353 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC092573.2-201ENST00000434546 243 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC129850.1-201ENST00000436203 508 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 RPS3P1-201ENST00000456781 192 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC104164.3-201ENST00000467363 1258 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 RN7SKP24-201ENST00000515888 284 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 RNA5SP320-201ENST00000516263 124 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 HMGB1P41-201ENST00000520234 440 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 DEFB108D-201ENST00000527787 222 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 RPAP2P1-201ENST00000603626 1168 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC006023.1-201ENST00000603944 259 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC097504.2-201ENST00000608088 454 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC004852.3-201ENST00000614131 326 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 MIR6817-201ENST00000615588 66 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 U4.3-201ENST00000621047 82 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC010297.1-201ENST00000623948 149 ntBASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.89□□□□□ -1.95
CCDC148Q8NFR7 AC080188.3-201ENST00000624842 748 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms