Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL670379.5-201ENST00000605253 252 ntBASIC4.59□□□□□ -1.67
NUP43Q8NFH3 AL670379.8-201ENST00000605353 252 ntBASIC4.59□□□□□ -1.67
NUP43Q8NFH3 AL670379.7-201ENST00000605823 252 ntBASIC4.59□□□□□ -1.67
NUP43Q8NFH3 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.59□□□□□ -1.67
NUP43Q8NFH3 SNHG22-203ENST00000617833 660 ntBASIC4.59□□□□□ -1.67
NUP43Q8NFH3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
NUP43Q8NFH3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP43Q8NFH3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.59□□□□□ -1.68
NUP43Q8NFH3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.59□□□□□ -1.68
NUP43Q8NFH3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NUP43Q8NFH3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
NUP43Q8NFH3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NUP43Q8NFH3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AL357515.1-201ENST00000402967 542 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 TBCAP2-201ENST00000416175 326 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AL139095.3-201ENST00000419672 1203 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AL590632.1-201ENST00000424289 371 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC000111.2-201ENST00000448200 210 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 GSTA11P-201ENST00000452866 669 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 snoU109.4-201ENST00000458953 143 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 RNU7-167P-201ENST00000459160 62 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 HMGB1P25-201ENST00000468402 607 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC104472.2-201ENST00000469035 601 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC021146.3-201ENST00000511911 260 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 SNORA14.1-201ENST00000516113 141 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 RN7SKP277-201ENST00000516895 283 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 GSTP1P1-201ENST00000548078 319 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 HMGN2P6-201ENST00000551091 273 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 MIR3941-201ENST00000582572 103 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC006363.1-201ENST00000603806 463 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AL031320.1-201ENST00000604177 357 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC024940.4-201ENST00000605507 246 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC009229.3-201ENST00000608056 282 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 U2.17-201ENST00000611454 95 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC006157.1-201ENST00000611750 366 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AC068870.2-201ENST00000620635 389 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 AL589994.2-201ENST00000621124 579 ntBASIC4.58□□□□□ -1.68
NUP43Q8NFH3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NUP43Q8NFH3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 RNU6-989P-201ENST00000362756 107 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.153-201ENST00000363615 91 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.176-201ENST00000363815 109 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.188-201ENST00000363952 111 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 SET-203ENST00000372688 801 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.473-201ENST00000384333 102 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 RNU6-1222P-201ENST00000384615 107 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 MIR765-201ENST00000390226 114 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AL078599.1-201ENST00000402075 293 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 RNU4-65P-201ENST00000410473 140 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 E2F6P2-201ENST00000420708 748 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC096644.2-201ENST00000429278 159 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AL353597.2-202ENST00000434901 373 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC008481.1-201ENST00000463278 396 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC128713.1-201ENST00000471495 306 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC117503.1-201ENST00000472241 394 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC103987.1-201ENST00000473394 348 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC140172.1-201ENST00000502928 141 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 MTND4LP22-201ENST00000508209 276 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.661-201ENST00000516003 99 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.708-201ENST00000516950 96 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 CR383656.7-201ENST00000548164 174 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AL138889.2-201ENST00000603883 242 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms