Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RPS16P5-201ENST00000406501 404 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 OR6C66P-201ENST00000414917 930 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 GTF2IP13-201ENST00000438487 386 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 Z80107.2-201ENST00000445127 392 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 PRPS1P1-201ENST00000445305 876 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 BX276092.4-201ENST00000452056 248 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 Y_RNA.639-201ENST00000458981 102 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC108751.2-201ENST00000469993 231 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 RPL12P20-201ENST00000475538 479 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 RNU6-864P-201ENST00000516256 108 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 RN7SKP277-201ENST00000516895 283 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 IGKV2D-36-201ENST00000518643 226 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC109635.4-202ENST00000531666 412 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 MIR3171-201ENST00000584270 74 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 MIR4293-201ENST00000584305 78 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AL022099.1-201ENST00000604551 712 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 CTHRC1P1-201ENST00000605383 469 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC116312.1-201ENST00000606841 314 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 MIR6820-201ENST00000611508 62 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC090971.5-201ENST00000621102 293 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 ZNF734P-201ENST00000419494 1534 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC244517.1-201ENST00000606030 2086 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC012618.3-205ENST00000637896 1496 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 Y_RNA.128-201ENST00000363391 112 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 Y_RNA.414-201ENST00000384011 101 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 RNU6-474P-201ENST00000384243 107 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 SNORD116-29-201ENST00000384516 83 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 Y_RNA.530-201ENST00000384587 101 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 MIR606-201ENST00000384851 96 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 MIR585-201ENST00000384887 94 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 MIR192-201ENST00000384915 110 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 UBE2V1P2-201ENST00000397758 440 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 RNA5SP146-201ENST00000410743 123 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 RN7SKP106-201ENST00000410832 272 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AL590139.1-201ENST00000416267 400 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC245028.1-201ENST00000423259 256 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 RPL23AP38-201ENST00000423801 469 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AL359265.2-201ENST00000434367 631 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 RPS3AP52-201ENST00000435639 297 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 HMGB3P11-201ENST00000440127 604 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC007686.1-201ENST00000488511 463 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 MTCO1P29-201ENST00000496868 288 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 CCDC34P1-201ENST00000507441 517 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC005798.1-201ENST00000513715 387 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 SNORA25.17-201ENST00000517184 124 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 FAM60DP-201ENST00000524174 632 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 ELOCP31-201ENST00000540463 467 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 SETP7-201ENST00000552169 453 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC012182.1-201ENST00000570133 895 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC024619.4-201ENST00000580924 316 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC209154.1-201ENST00000582156 337 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms