Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC107954.1-201ENST00000565906 727 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 MIR4795-201ENST00000584182 89 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 NF1P5-201ENST00000588287 448 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 AC005498.1-201ENST00000592125 465 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 AC112187.2-201ENST00000604345 283 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 AL009028.1-201ENST00000604895 802 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE4Q8N205 AL008729.2-201ENST00000606393 473 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 YWHAEP7-203ENST00000622054 312 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 AC112204.3-201ENST00000623822 332 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE4Q8N205 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 FARSBP1-201ENST00000435808 1778 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 UBE3AP2-201ENST00000429033 2259 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE4Q8N205 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE4Q8N205 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE4Q8N205 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE4Q8N205 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE4Q8N205 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE4Q8N205 RNU6-877P-201ENST00000383868 107 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 RNU6-332P-201ENST00000391193 108 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 SNRPEP2-201ENST00000397592 279 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 RPL31P52-201ENST00000407532 367 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC002486.1-201ENST00000435098 391 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC239809.1-201ENST00000450470 217 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 SNORD105B-201ENST00000458770 79 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 RNU6-420P-201ENST00000458780 107 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 RPL39P36-201ENST00000490784 156 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 RPL7P23-201ENST00000493874 747 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 POU5F1P7-201ENST00000508759 541 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC018797.3-201ENST00000513388 1241 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 LRRC34P2-201ENST00000514850 553 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AP005639.2-201ENST00000527592 928 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC093027.1-201ENST00000546698 429 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 CBX3P5-201ENST00000552017 521 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AL157394.1-201ENST00000562983 1224 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC022432.1-201ENST00000595739 310 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC007363.1-201ENST00000604736 620 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC011816.2-201ENST00000607089 556 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC243773.3-201ENST00000613270 256 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 MIR8058-201ENST00000615737 89 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 PISRT1-201ENST00000626175 531 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 AC024614.3-201ENST00000637860 256 ntBASIC4.61□□□□□ -1.67
SYNE4Q8N205 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE4Q8N205 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNE4Q8N205 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNE4Q8N205 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 MAPK10-253ENST00000641010 4072 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC090337.1-201ENST00000579651 2074 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SYNE4Q8N205 LINC01355-201ENST00000566551 5444 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SYNE4Q8N205 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 GNG5P1-201ENST00000255500 204 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 RNU6-441P-201ENST00000384545 106 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 Y_RNA.573-201ENST00000384763 105 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 SNORA68.2-201ENST00000391263 128 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 RNA5SP146-201ENST00000410743 123 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 SPA17P1-201ENST00000416656 452 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 FCF1P1-201ENST00000432690 571 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 RSU1P2-202ENST00000437884 485 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC093019.1-201ENST00000443135 252 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 UBE2DNL-203ENST00000474922 222 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC022447.3-201ENST00000506865 495 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 RNA5SP216-201ENST00000516111 123 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 Y_RNA.675-201ENST00000516389 149 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 RMST_3.1-201ENST00000611651 109 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC009233.1-201ENST00000616477 371 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 AC009237.17-201ENST00000618111 748 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms