Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 INTS6P1-201ENST00000504674 2530 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX5Q8N196 MIR153-1-201ENST00000384914 90 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 RNU6-882P-201ENST00000391025 103 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AL445529.1-201ENST00000398713 389 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AC015977.1-201ENST00000418887 292 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX5Q8N196 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX5Q8N196 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX5Q8N196 OSTCP8-201ENST00000445117 448 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 CEACAMP6-201ENST00000452007 574 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 RN7SL459P-201ENST00000481078 302 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AC011005.2-201ENST00000487324 359 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 RPS15AP34-201ENST00000487776 387 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AC008897.1-201ENST00000494006 347 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 RN7SL591P-201ENST00000496150 292 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX5Q8N196 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.57□□□□□ -1.52
SIX5Q8N196 RNU6-914P-201ENST00000516749 109 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AC009643.1-201ENST00000532030 391 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX5Q8N196 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX5Q8N196 AC084783.1-201ENST00000565846 910 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AC011447.4-201ENST00000587562 111 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX5Q8N196 AC006272.2-201ENST00000594725 163 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 Z98751.3-201ENST00000604447 521 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 SNORD58B-201ENST00000607313 66 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 SNORD91B-202ENST00000608459 222 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AC005344.1-201ENST00000613391 459 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 AL031601.2-202ENST00000622650 282 ntBASIC5.57□□□□□ -1.52
SIX5Q8N196 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIX5Q8N196 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
SIX5Q8N196 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX5Q8N196 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SIX5Q8N196 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIX5Q8N196 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX5Q8N196 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIX5Q8N196 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SIX5Q8N196 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIX5Q8N196 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
SIX5Q8N196 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIX5Q8N196 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIX5Q8N196 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIX5Q8N196 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIX5Q8N196 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.56□□□□□ -1.52
SIX5Q8N196 RNA5SP453-201ENST00000362503 119 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 Y_RNA.210-201ENST00000364161 110 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 RNU6-371P-201ENST00000364283 108 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 SNORD14.1-201ENST00000365609 90 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 RNU6-76P-201ENST00000384060 104 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 Y_RNA.512-201ENST00000384518 102 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 RPL23AP17-201ENST00000401064 499 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 SYF2P2-201ENST00000417620 583 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 HMGN2P27-201ENST00000427352 270 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.56□□□□□ -1.52
SIX5Q8N196 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.56□□□□□ -1.52
SIX5Q8N196 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.56□□□□□ -1.52
SIX5Q8N196 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.56□□□□□ -1.52
SIX5Q8N196 FTH1P25-201ENST00000447665 469 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AL591623.2-201ENST00000449978 222 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AC009963.2-201ENST00000453431 138 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 RPL17P19-201ENST00000489069 552 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 RPS4XP20-201ENST00000505751 772 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AC105758.1-201ENST00000506038 399 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.56□□□□□ -1.52
SIX5Q8N196 AC136777.2-201ENST00000522979 358 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 SNRPGP16-201ENST00000533275 226 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AC024940.3-201ENST00000538551 316 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.56□□□□□ -1.52
SIX5Q8N196 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.56□□□□□ -1.52
SIX5Q8N196 AL161713.1-201ENST00000555538 145 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.56□□□□□ -1.52
SIX5Q8N196 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.56□□□□□ -1.52
SIX5Q8N196 SNORD84-203ENST00000584275 78 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.56□□□□□ -1.52
SIX5Q8N196 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.56□□□□□ -1.52
SIX5Q8N196 AC016727.2-201ENST00000603988 621 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AL021879.1-201ENST00000611756 288 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 HMGB1P24-202ENST00000615653 685 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AC091905.4-201ENST00000623432 202 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 AC073869.10-201ENST00000642016 354 ntBASIC5.56□□□□□ -1.52
SIX5Q8N196 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIX5Q8N196 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SIX5Q8N196 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 ZNF285B-201ENST00000561698 1767 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 RNU6-356P-201ENST00000384140 107 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 AL133396.1-201ENST00000432048 687 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 DAP3P1-201ENST00000441522 278 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX5Q8N196 AP000942.1-201ENST00000463969 747 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 AF213884.1-201ENST00000488102 463 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 MTND3P25-201ENST00000509243 135 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms