Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 Y_RNA.128-201ENST00000363391 112 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 SNORD113.2-201ENST00000364166 89 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 Y_RNA.339-201ENST00000365325 102 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 SNORD42.2-201ENST00000365570 69 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 SNORA70F-201ENST00000384142 135 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1013P-201ENST00000384180 107 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-821P-201ENST00000390995 107 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-754P-201ENST00000391166 107 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RNA5SP397-201ENST00000391323 118 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 FAR2P2-201ENST00000413041 594 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC005517.2-201ENST00000424673 553 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RPL7P46-201ENST00000425129 740 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 FAR2P4-202ENST00000425399 584 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AL138785.1-201ENST00000425821 331 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RPS20P1-201ENST00000434853 354 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC005019.1-201ENST00000436455 431 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 FGF7P3-201ENST00000454645 303 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 snoU109.4-201ENST00000458953 143 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 Y_RNA.635-201ENST00000459041 101 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RN7SL481P-201ENST00000477764 299 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RPL36AP41-201ENST00000493820 306 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RBBP4P6-201ENST00000508098 202 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AL137161.1-201ENST00000532231 390 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC209154.1-201ENST00000582156 337 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AL670379.11-201ENST00000604059 253 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AL670379.10-201ENST00000604330 253 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AL670379.12-201ENST00000605291 253 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC080078.3-201ENST00000605407 463 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AL670379.9-201ENST00000605428 253 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AL008729.2-201ENST00000606393 473 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AL589994.2-201ENST00000621124 579 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 MIR7641-1-201ENST00000627518 61 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AC027287.1-201ENST00000553115 1453 ntBASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM48Q8IWZ4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 GABPAP-201ENST00000419271 1356 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AC000123.3-201ENST00000624029 4975 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-960P-201ENST00000364056 120 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 SNORA4.3-201ENST00000365564 137 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 RNA5SP56-201ENST00000410277 118 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 RPL30P2-201ENST00000414021 291 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 ARL5AP1-201ENST00000418991 388 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 BEND7P1-201ENST00000422058 457 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 EIF4HP2-201ENST00000424380 563 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 MRPL48P1-201ENST00000445390 636 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 PPIAP3-201ENST00000450588 505 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 SNORD97-201ENST00000459187 142 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 RPL7P43-201ENST00000478876 753 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AC012181.1-201ENST00000479895 423 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 MTCO1P29-201ENST00000496868 288 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 TRBVA-201ENST00000498804 316 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 KLHL2P1-201ENST00000508691 521 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 RN7SKP234-201ENST00000517173 224 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 HMGN1P28-201ENST00000521340 364 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 ELOCP31-201ENST00000540463 467 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AC067852.4-201ENST00000590314 478 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AL669831.4-202ENST00000590817 238 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 AL355812.1-201ENST00000603215 216 ntBASIC4.53□□□□□ -1.68
TRIM48Q8IWZ4 RNF138P2-201ENST00000603490 592 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms