Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL031176.1-201ENST00000604554 466 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC069304.2-201ENST00000605154 435 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 MIR8057-201ENST00000620957 69 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC080100.1-201ENST00000624239 5356 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL513185.3-201ENST00000433335 1300 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL355596.1-201ENST00000565399 3996 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 CDR1-202ENST00000625883 1485 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 FRG1BP-201ENST00000278882 761 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 RNU6-173P-201ENST00000364215 104 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 RNU6-1176P-201ENST00000390955 107 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 SNORA11-201ENST00000408789 128 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 ATG3P1-201ENST00000419507 911 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 RPL21P32-201ENST00000419877 477 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AL513175.2-201ENST00000422071 443 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 CR769767.1-201ENST00000436337 346 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 RPL23AP76-201ENST00000441860 458 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 MRPL50P4-201ENST00000446432 475 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC113420.1-201ENST00000507903 571 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC010374.2-201ENST00000512933 535 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 SNORA74D-201ENST00000516404 141 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 HSPE1P3-201ENST00000559254 309 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC090695.1-201ENST00000561269 1222 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 BNIP3P27-201ENST00000599991 412 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 DUXAP4-201ENST00000603046 613 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC024153.1-201ENST00000603103 365 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC243773.3-201ENST00000613270 256 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 AC013437.2-201ENST00000639587 677 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.89□□□□□ -1.95
CCDC50Q8IVM0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 SNORD116-12-201ENST00000384468 92 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 MIR1289-1-201ENST00000408836 144 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC024082.2-201ENST00000434771 238 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC112653.1-201ENST00000443851 386 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AP000852.1-201ENST00000472460 573 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC017037.2-201ENST00000513850 890 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 DNAJC8P1-201ENST00000554535 372 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AL132657.2-201ENST00000564417 358 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC009220.3-201ENST00000604318 586 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC004853.1-201ENST00000604902 698 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AL442067.2-201ENST00000614033 363 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AP003122.6-201ENST00000623831 495 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 AC009812.4-201ENST00000569134 1805 ntBASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CCDC50Q8IVM0 TAB3P1-202ENST00000452645 1634 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AC011460.1-201ENST00000636268 1834 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 MIR208A-201ENST00000362287 71 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AL356131.1-201ENST00000405826 414 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 MTATP6P27-201ENST00000416987 621 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 Z75741.2-201ENST00000417272 1167 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 NANOGP2-201ENST00000435391 727 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 RNF2P1-201ENST00000442955 1010 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AC109464.2-201ENST00000510242 943 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AC022861.1-201ENST00000522981 663 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AP001804.3-201ENST00000525146 880 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 YWHAZP1-201ENST00000556286 722 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 DUXAP11-201ENST00000603858 526 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AC069431.2-201ENST00000604149 1099 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AF129408.1-201ENST00000608767 431 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 PART1_2.1-201ENST00000612397 250 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 AL049777.1-201ENST00000622740 518 ntBASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC50Q8IVM0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC50Q8IVM0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC50Q8IVM0 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
CCDC50Q8IVM0 SNORA18.3-201ENST00000384122 132 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms