Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AL161713.1-201ENST00000555538 145 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 MTATP6P3-201ENST00000581686 676 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AC016877.3-201ENST00000606778 504 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AC096586.2-201ENST00000610260 441 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 SNORD114-27-201ENST00000363766 70 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AC244033.1-201ENST00000426826 870 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AC078918.1-201ENST00000498515 228 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 RNA5SP476-201ENST00000516613 103 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 SNORA31.15-201ENST00000516771 132 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 LLPHP1-201ENST00000603571 367 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 MIR98-201ENST00000606724 119 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AC091895.1-201ENST00000624494 256 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 RNU4-7P-201ENST00000364758 141 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 RNU1-139P-201ENST00000391307 165 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AL591704.1-201ENST00000432574 275 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 BNIP3P2-201ENST00000441221 577 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC021146.8-201ENST00000507455 733 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 MTND4LP22-201ENST00000508209 276 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC103810.1-201ENST00000579873 453 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 MIR151B-201ENST00000584249 96 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AL049779.4-201ENST00000604500 156 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 RNU6-174P-201ENST00000410406 106 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 MTND4LP21-201ENST00000415303 295 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC073464.3-201ENST00000422564 712 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 SNX5P1-201ENST00000505757 1041 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC087241.2-201ENST00000535801 324 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC012321.1-201ENST00000561622 1588 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 RNU1-93P-201ENST00000364704 169 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 RNA5SP160-201ENST00000364866 120 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 MTCO3P30-201ENST00000426425 670 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AL354695.1-201ENST00000427935 228 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 AC098799.2-201ENST00000509466 868 ntBASIC1.14□□□□□ -2.23
CSMD3Q7Z407 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
CSMD3Q7Z407 HMGN2P18-201ENST00000450680 270 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 OR5H4P-201ENST00000510851 923 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AC019176.1-201ENST00000518519 225 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AP000907.2-201ENST00000530827 353 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AP004242.1-201ENST00000533701 349 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AC024614.2-201ENST00000577584 372 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 MIR3670-2-201ENST00000582974 65 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 MIR3670-1-201ENST00000584160 65 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 MIR3670-3-201ENST00000584855 65 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 MIR3670-4-201ENST00000612260 65 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 MIR4278-201ENST00000636094 69 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 RNU6-1105P-201ENST00000384774 107 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 TRIAP1P1-201ENST00000427062 225 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 HAUS1P1-201ENST00000505275 832 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AC002487.1-201ENST00000604565 994 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 ZNF271P-202ENST00000465539 1970 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 SNORD48-201ENST00000364953 64 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 ELOCP10-201ENST00000440624 327 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 KATNBL1P3-201ENST00000443475 909 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 RSL24D1P2-201ENST00000445584 366 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 RNU6-1223P-201ENST00000517124 104 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AP005660.1-201ENST00000522972 293 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.13□□□□□ -2.23
CSMD3Q7Z407 ELOCP34-201ENST00000604436 327 ntBASIC1.13□□□□□ -2.23
CSMD3Q7Z407 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 RNA5SP37-201ENST00000365420 130 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AL136133.1-201ENST00000413694 376 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC109486.1-201ENST00000486833 374 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 RN7SKP5-201ENST00000517045 272 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 MTND2P17-201ENST00000550281 688 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms