Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 AC021171.1-201ENST00000603137 706 ntBASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 AP000811.1-201ENST00000603803 651 ntBASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 AC097468.3-201ENST00000607956 456 ntBASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 AC024560.3-201ENST00000608482 349 ntBASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 ZNF542P-204ENST00000482727 1305 ntBASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 AL513302.2-201ENST00000562313 1842 ntBASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
NHLRC1Q6VVB1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RNA5SP139-201ENST00000364340 117 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 Y_RNA.302-201ENST00000364997 102 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 SNORA36C-201ENST00000384289 132 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RNU6-278P-201ENST00000390945 109 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL109755.1-201ENST00000401791 649 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 SNORA11.1-201ENST00000408133 129 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RPL17P12-201ENST00000413391 526 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RPL23AP39-201ENST00000415533 405 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 SPA17P1-201ENST00000416656 452 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC068533.1-201ENST00000418542 415 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL390023.1-201ENST00000428836 262 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 MTCYBP39-201ENST00000437562 491 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC091862.1-201ENST00000438016 1100 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL008629.1-201ENST00000438615 184 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 FAM103A2P-201ENST00000444122 354 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL358232.1-201ENST00000448030 501 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AL162389.1-201ENST00000449233 177 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC098826.2-201ENST00000452011 651 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RPS4XP2-201ENST00000458402 793 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 snoU13.22-201ENST00000459428 104 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RPL7P15-201ENST00000461190 712 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC023598.1-201ENST00000472521 361 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC072039.1-201ENST00000477611 581 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC021205.2-201ENST00000480069 347 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RPS4XP22-201ENST00000480755 780 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC021146.5-201ENST00000503544 545 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC112198.1-201ENST00000505369 1220 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 MTND4LP22-201ENST00000508209 276 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RN7SKP287-201ENST00000516546 266 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 HMGB1P6-201ENST00000569046 646 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC068790.3-201ENST00000602988 553 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC093424.1-201ENST00000604999 338 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AP003355.3-201ENST00000623465 114 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 AC068057.2-201ENST00000624047 895 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
NHLRC1Q6VVB1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 FRG1CP-201ENST00000358464 769 ntBASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 SNORA14A-201ENST00000364773 135 ntBASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 RNU6-741P-201ENST00000383889 107 ntBASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 RNU6-1200P-201ENST00000384162 107 ntBASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 RNU5A-2P-201ENST00000384337 116 ntBASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 ATP5JP1-201ENST00000431631 322 ntBASIC3.12□□□□□ -1.91
NHLRC1Q6VVB1 AL133547.1-201ENST00000448546 220 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms