Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AP000889.1-201ENST00000530968 660 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC011447.4-201ENST00000587562 111 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC125232.2-201ENST00000592457 143 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC116447.1-201ENST00000613153 453 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 SNHG22-203ENST00000617833 660 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC015967.1-201ENST00000619893 476 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AC073869.10-201ENST00000642016 354 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AL031119.1-201ENST00000404707 1879 ntBASIC6.02□□□□□ -1.45
RNF20Q5VTR2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.02□□□□□ -1.45
RNF20Q5VTR2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 MTND5P7-201ENST00000413558 1798 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 SAMMSON-213ENST00000641336 1521 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 Y_RNA.461-201ENST00000384263 103 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 RNU6-472P-201ENST00000384299 107 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 SNORD51-201ENST00000384320 80 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 RNU2-64P-201ENST00000411315 191 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 RNU6-603P-201ENST00000411403 107 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 PSMA2P3-201ENST00000429685 675 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC097713.2-201ENST00000430199 356 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 HSFY6P-201ENST00000445573 403 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC010655.1-201ENST00000449336 292 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC092647.2-201ENST00000452998 253 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC007967.1-201ENST00000455422 1159 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 RNU6-307P-201ENST00000516743 106 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC022616.4-201ENST00000522985 181 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AP000859.1-201ENST00000525536 307 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC023157.2-201ENST00000540596 141 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 GSTP1P1-201ENST00000548078 319 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC006254.3-201ENST00000603353 884 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AC093591.2-201ENST00000565254 3843 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 AP000542.2-201ENST00000623199 6179 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RNF20Q5VTR2 EIF2AP4-201ENST00000424793 1781 ntBASIC6.01□□□□□ -1.45
RNF20Q5VTR2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF20Q5VTR2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RNF20Q5VTR2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6□□□□□ -1.45
RNF20Q5VTR2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6□□□□□ -1.45
RNF20Q5VTR2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
RNF20Q5VTR2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF20Q5VTR2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RNF20Q5VTR2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6□□□□□ -1.45
RNF20Q5VTR2 Y_RNA.314-201ENST00000365114 102 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF20Q5VTR2 U3.36-201ENST00000408418 213 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 RNA5SP296-201ENST00000410523 111 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6□□□□□ -1.45
RNF20Q5VTR2 RPS15AP40-201ENST00000419621 391 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6□□□□□ -1.45
RNF20Q5VTR2 AC099799.1-201ENST00000439809 192 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 AL450023.3-201ENST00000440592 271 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6□□□□□ -1.45
RNF20Q5VTR2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6□□□□□ -1.45
RNF20Q5VTR2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6□□□□□ -1.45
RNF20Q5VTR2 RNU6-1132P-201ENST00000459214 107 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 CEACAMP10-202ENST00000495431 496 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6□□□□□ -1.45
RNF20Q5VTR2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6□□□□□ -1.45
RNF20Q5VTR2 RPL23AP53-201ENST00000521854 457 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6□□□□□ -1.45
RNF20Q5VTR2 SETP7-201ENST00000552169 453 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6□□□□□ -1.45
RNF20Q5VTR2 AC005899.2-201ENST00000584353 90 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 SUMO2P15-201ENST00000604285 278 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 AC004805.2-201ENST00000605382 482 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 AP001784.1-201ENST00000624107 428 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 AC010329.2-201ENST00000595195 2737 ntBASIC6□□□□□ -1.45
RNF20Q5VTR2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
RNF20Q5VTR2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms