Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MED6P1-201ENST00000439659 713 ntBASIC2.64□□□□□ -1.99
HMGXB3Q12766 AC007395.1-201ENST00000451333 677 ntBASIC2.64□□□□□ -1.99
HMGXB3Q12766 AC034222.1-201ENST00000494052 532 ntBASIC2.64□□□□□ -1.99
HMGXB3Q12766 DUXAP3-201ENST00000603616 594 ntBASIC2.64□□□□□ -1.99
HMGXB3Q12766 AC012493.3-201ENST00000604494 112 ntBASIC2.64□□□□□ -1.99
HMGXB3Q12766 AL592494.3-201ENST00000609485 464 ntBASIC2.64□□□□□ -1.99
HMGXB3Q12766 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGXB3Q12766 RNU1-22P-201ENST00000363334 158 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 AL365400.1-201ENST00000431854 640 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGXB3Q12766 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGXB3Q12766 AC022431.1-201ENST00000450941 438 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 AL133216.2-202ENST00000634512 349 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGXB3Q12766 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGXB3Q12766 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
HMGXB3Q12766 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HMGXB3Q12766 RNU6-146P-201ENST00000384602 108 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 WARS2P1-201ENST00000429678 537 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 AC017099.1-201ENST00000448261 1028 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGXB3Q12766 RNA5SP220-201ENST00000516298 104 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGXB3Q12766 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGXB3Q12766 AP001029.3-201ENST00000588063 596 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 AC083899.3-201ENST00000603413 594 ntBASIC2.63□□□□□ -1.99
HMGXB3Q12766 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGXB3Q12766 AC114546.3-201ENST00000623582 1734 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 AC093536.2-201ENST00000565257 1406 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 OR4G11P-202ENST00000642116 1414 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 AC092638.1-201ENST00000411966 1275 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 MTND1P23-201ENST00000416931 372 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 MTND2P16-201ENST00000419987 799 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 AC099336.2-201ENST00000422457 254 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 AL513185.2-201ENST00000425543 193 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 AC139103.1-201ENST00000534696 1030 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGXB3Q12766 AC234775.3-201ENST00000564612 656 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 RPL23AP78-201ENST00000599928 470 ntBASIC2.62□□□□□ -1.99
HMGXB3Q12766 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HMGXB3Q12766 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGXB3Q12766 AL118496.1-201ENST00000440201 1812 ntBASIC2.61□□□□□ -1.99
HMGXB3Q12766 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGXB3Q12766 AL354695.1-201ENST00000427935 228 ntBASIC2.61□□□□□ -1.99
HMGXB3Q12766 AC092155.2-201ENST00000454675 477 ntBASIC2.61□□□□□ -1.99
HMGXB3Q12766 RPS29P29-201ENST00000456396 171 ntBASIC2.61□□□□□ -1.99
HMGXB3Q12766 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGXB3Q12766 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGXB3Q12766 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.61□□□□□ -1.99
HMGXB3Q12766 RNA5SP61-201ENST00000516453 100 ntBASIC2.61□□□□□ -1.99
HMGXB3Q12766 AC116447.1-201ENST00000613153 453 ntBASIC2.61□□□□□ -1.99
HMGXB3Q12766 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGXB3Q12766 RNU6-1263P-201ENST00000384601 106 ntBASIC2.6□□□□□ -1.99
HMGXB3Q12766 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGXB3Q12766 AC109583.1-201ENST00000432156 268 ntBASIC2.6□□□□□ -1.99
HMGXB3Q12766 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGXB3Q12766 DPPA3P1-201ENST00000448050 469 ntBASIC2.6□□□□□ -1.99
HMGXB3Q12766 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGXB3Q12766 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.6□□□□□ -1.99
HMGXB3Q12766 AL159169.2-201ENST00000610061 1269 ntBASIC2.6□□□□□ -1.99
HMGXB3Q12766 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-1-201ENST00000383898 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-42P-201ENST00000384165 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-36P-201ENST00000384172 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-4P-201ENST00000384205 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-5P-201ENST00000384238 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-3P-201ENST00000384314 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-2-201ENST00000384627 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-9-201ENST00000384776 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-33P-201ENST00000384793 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNA5SP489-201ENST00000410986 109 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.59□□□□□ -1.99
HMGXB3Q12766 HMGB1P45-201ENST00000435986 653 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 AC092991.1-201ENST00000477176 376 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGXB3Q12766 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.59□□□□□ -1.99
HMGXB3Q12766 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGXB3Q12766 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.59□□□□□ -1.99
HMGXB3Q12766 MIR3935-201ENST00000583472 104 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 RNU6-6P-201ENST00000606623 107 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 MIR6078-201ENST00000611069 100 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 AL121594.5-201ENST00000631724 573 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 NUP58P1-201ENST00000502546 1738 ntBASIC2.59□□□□□ -1.99
HMGXB3Q12766 XKRY2-202ENST00000623874 1581 ntBASIC2.59□□□□□ -2
HMGXB3Q12766 XKRY-202ENST00000624960 1581 ntBASIC2.59□□□□□ -2
HMGXB3Q12766 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.58□□□□□ -2
HMGXB3Q12766 HMGN1P33-201ENST00000432945 451 ntBASIC2.58□□□□□ -2
HMGXB3Q12766 CALM1P1-201ENST00000442082 433 ntBASIC2.58□□□□□ -2
HMGXB3Q12766 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.58□□□□□ -2
HMGXB3Q12766 RPL23AP88-201ENST00000605759 454 ntBASIC2.58□□□□□ -2
HMGXB3Q12766 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.58□□□□□ -2
HMGXB3Q12766 AL596028.1-201ENST00000326971 197 ntBASIC2.58□□□□□ -2
HMGXB3Q12766 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.58□□□□□ -2
HMGXB3Q12766 HMGB3P10-201ENST00000434734 572 ntBASIC2.58□□□□□ -2
HMGXB3Q12766 MTCYBP45-201ENST00000435243 565 ntBASIC2.58□□□□□ -2
HMGXB3Q12766 RPL7P31-201ENST00000450192 724 ntBASIC2.58□□□□□ -2
HMGXB3Q12766 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.58□□□□□ -2
HMGXB3Q12766 RN7SKP34-201ENST00000516142 244 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms