Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSRP1Q08945 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SSRP1Q08945 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSRP1Q08945 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSRP1Q08945 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSRP1Q08945 Z82217.1-201ENST00000625157 8149 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.89□□□□□ -1.63
SSRP1Q08945 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSRP1Q08945 EXOC5P1-201ENST00000510543 1969 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SSRP1Q08945 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.89□□□□□ -1.63
SSRP1Q08945 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SSRP1Q08945 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSRP1Q08945 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSRP1Q08945 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSRP1Q08945 RPL7P26-201ENST00000333817 754 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 Y_RNA.279-201ENST00000364763 95 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 RNA5SP366-201ENST00000365454 123 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSRP1Q08945 AL136116.1-201ENST00000403591 381 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AC090774.1-201ENST00000435925 246 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.89□□□□□ -1.63
SSRP1Q08945 AC073415.1-201ENST00000449240 153 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.89□□□□□ -1.63
SSRP1Q08945 SNORD108-201ENST00000459332 71 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 MRPS17P3-201ENST00000465453 385 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 MTCO2P30-201ENST00000503662 364 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AC114786.4-201ENST00000508771 728 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 PARP4P3-201ENST00000510265 317 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.89□□□□□ -1.63
SSRP1Q08945 RNU6-1092P-201ENST00000516955 87 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 RAB9BP1-201ENST00000519581 626 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.89□□□□□ -1.63
SSRP1Q08945 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSRP1Q08945 AC063950.1-201ENST00000552036 308 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.89□□□□□ -1.63
SSRP1Q08945 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.89□□□□□ -1.63
SSRP1Q08945 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.89□□□□□ -1.63
SSRP1Q08945 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.89□□□□□ -1.63
SSRP1Q08945 AC012443.1-201ENST00000605605 231 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AC009994.1-201ENST00000606889 253 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.89□□□□□ -1.63
SSRP1Q08945 AC130324.3-201ENST00000614165 542 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 MIR4275-201ENST00000636486 87 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSRP1Q08945 MAPK10-349ENST00000641767 3661 ntBASIC4.89□□□□□ -1.63
SSRP1Q08945 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.89□□□□□ -1.63
SSRP1Q08945 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSRP1Q08945 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSRP1Q08945 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.88□□□□□ -1.63
SSRP1Q08945 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSRP1Q08945 RIOK3P1-201ENST00000418778 1528 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSRP1Q08945 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.88□□□□□ -1.63
SSRP1Q08945 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SSRP1Q08945 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SSRP1Q08945 NACAP2-201ENST00000318548 624 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 Y_RNA.86-201ENST00000363020 111 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 Y_RNA.157-201ENST00000363638 102 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 RNU6-960P-201ENST00000364056 120 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 SNORA62.1-201ENST00000364287 154 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 RNU4-25P-201ENST00000410569 230 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 RNU2-41P-201ENST00000410991 178 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.88□□□□□ -1.63
SSRP1Q08945 EIF4EP1-201ENST00000422311 642 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 RPL18P10-201ENST00000425606 538 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.88□□□□□ -1.63
SSRP1Q08945 FTH1P2-201ENST00000466086 412 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 AC091951.2-201ENST00000500762 203 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSRP1Q08945 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.88□□□□□ -1.63
SSRP1Q08945 LRRC34P2-201ENST00000514850 553 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 RNU6-875P-201ENST00000516488 106 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 NCAPGP2-201ENST00000557911 754 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.88□□□□□ -1.63
SSRP1Q08945 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.88□□□□□ -1.63
SSRP1Q08945 MIR4284-201ENST00000578924 81 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 RN7SL176P-201ENST00000580352 264 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 AC233309.1-201ENST00000619522 751 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 MIR7702-201ENST00000621931 59 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.88□□□□□ -1.63
SSRP1Q08945 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.88□□□□□ -1.63
SSRP1Q08945 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.88□□□□□ -1.63
SSRP1Q08945 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SSRP1Q08945 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSRP1Q08945 GABPAP-201ENST00000419271 1356 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.88□□□□□ -1.63
SSRP1Q08945 AL354685.2-201ENST00000448218 1447 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 LINC01109-201ENST00000603837 3081 ntBASIC4.88□□□□□ -1.63
SSRP1Q08945 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SSRP1Q08945 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.87□□□□□ -1.63
SSRP1Q08945 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSRP1Q08945 RNU6-179P-201ENST00000363350 107 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 RNU6-882P-201ENST00000391025 103 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 RPL23AP26-201ENST00000412728 464 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 RPL23AP46-201ENST00000438548 490 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.87□□□□□ -1.63
SSRP1Q08945 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.87□□□□□ -1.63
SSRP1Q08945 PMCHL2-203ENST00000457791 237 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 RPS29P15-201ENST00000458329 171 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms