Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 MTND5P1-201ENST00000445440 1375 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 LARP1BP1-201ENST00000506036 1359 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 Y_RNA.367-201ENST00000365544 101 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 Y_RNA.395-201ENST00000383945 109 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AL356421.1-201ENST00000403255 413 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 RNU4-25P-201ENST00000410569 230 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.81□□□□□ -1.8
SRSF4Q08170 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 BX510359.2-201ENST00000417920 305 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AC012065.2-201ENST00000421295 375 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.81□□□□□ -1.8
SRSF4Q08170 RPL7L1P10-201ENST00000427790 463 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AL590233.1-201ENST00000430017 456 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.81□□□□□ -1.8
SRSF4Q08170 ERLEC1P1-201ENST00000433806 578 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AC006480.1-201ENST00000449887 378 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AL590639.1-201ENST00000456484 337 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AC007547.1-201ENST00000462177 490 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AC006512.1-201ENST00000468816 291 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 PABPC1P3-201ENST00000469174 459 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AL136126.1-201ENST00000473603 402 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.81□□□□□ -1.8
SRSF4Q08170 HMGB3P15-201ENST00000507326 574 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 RNU6-1170P-201ENST00000515974 106 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 RN7SKP219-201ENST00000516825 296 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 RNU6-410P-201ENST00000517006 107 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 SNORA25.17-201ENST00000517184 124 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AL360157.1-201ENST00000565962 87 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 RN7SL690P-201ENST00000582087 240 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.81□□□□□ -1.8
SRSF4Q08170 GLUD1P4-201ENST00000590914 418 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AC006116.10-201ENST00000591836 581 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 DPPA3P3-201ENST00000603842 430 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 MIR432-201ENST00000606207 94 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.81□□□□□ -1.8
SRSF4Q08170 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AC103858.2-201ENST00000621471 543 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AL161637.1-201ENST00000622380 412 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AL359757.2-201ENST00000624309 274 ntBASIC3.81□□□□□ -1.8
SRSF4Q08170 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.81□□□□□ -1.8
SRSF4Q08170 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SRSF4Q08170 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.81□□□□□ -1.8
SRSF4Q08170 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRSF4Q08170 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.81□□□□□ -1.8
SRSF4Q08170 ASNSP1-201ENST00000518311 1939 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SRSF4Q08170 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SRSF4Q08170 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SRSF4Q08170 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SRSF4Q08170 AL161781.1-201ENST00000354277 403 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 RNY1P12-201ENST00000364251 105 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 RN7SKP227-201ENST00000364445 330 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 U3.12-201ENST00000364498 214 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 RNU4-48P-201ENST00000365559 182 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SRSF4Q08170 SNORA22B-201ENST00000383876 138 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 SNORA70F-201ENST00000384142 135 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 RNU6-1105P-201ENST00000384774 107 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 U3.30-201ENST00000391308 210 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 AL359634.1-202ENST00000404721 284 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 AL023807.1-201ENST00000407932 359 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 RNU6-193P-201ENST00000410977 107 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.8□□□□□ -1.8
SRSF4Q08170 AC018630.2-202ENST00000422992 927 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SRSF4Q08170 AL358176.2-201ENST00000425769 204 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 RPL23AP25-201ENST00000430973 463 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 RPS20P5-201ENST00000434808 360 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.8□□□□□ -1.8
SRSF4Q08170 HMGB3P22-202ENST00000451823 572 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 RNU7-152P-201ENST00000458982 64 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 PPIAP21-201ENST00000464473 501 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 AC020893.1-201ENST00000502452 580 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.8□□□□□ -1.8
SRSF4Q08170 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.8□□□□□ -1.8
SRSF4Q08170 TXNP6-201ENST00000510190 310 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.8□□□□□ -1.8
SRSF4Q08170 RN7SKP21-201ENST00000516503 220 ntBASIC3.8□□□□□ -1.8
SRSF4Q08170 COPS8P3-201ENST00000526024 482 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms