Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC123904.3-201ENST00000547218 814 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AL358072.1-201ENST00000604156 575 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC073569.3-201ENST00000619055 682 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC092159.4-201ENST00000624944 550 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
COL16A1Q07092 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.08□□□□□ -1.92
COL16A1Q07092 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
COL16A1Q07092 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL16A1Q07092 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.08□□□□□ -1.92
COL16A1Q07092 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL16A1Q07092 Y_RNA.436-201ENST00000384097 102 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 NCSTNP1-201ENST00000406229 144 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 TRGV6-201ENST00000417928 299 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 NDUFA5P4-201ENST00000436704 385 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 TAF9P1-201ENST00000445421 515 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 CASP3P1-201ENST00000446037 609 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.08□□□□□ -1.92
COL16A1Q07092 MTND1P29-201ENST00000448112 647 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL16A1Q07092 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.08□□□□□ -1.92
COL16A1Q07092 TAF9P2-201ENST00000454958 515 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 SNRPGP9-201ENST00000456025 225 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 TPTE2P5-203ENST00000458118 728 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC005410.1-202ENST00000460347 485 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 MTND2P14-201ENST00000482139 351 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 RPL23AP44-201ENST00000482216 473 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.08□□□□□ -1.92
COL16A1Q07092 RNU5A-4P-201ENST00000516588 111 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AL356057.1-201ENST00000533798 831 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC011611.5-201ENST00000552477 578 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AP005136.1-201ENST00000579765 429 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.08□□□□□ -1.92
COL16A1Q07092 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.08□□□□□ -1.92
COL16A1Q07092 AC024060.1-201ENST00000607052 494 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC067747.1-201ENST00000608026 250 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC007349.4-201ENST00000608114 532 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.08□□□□□ -1.92
COL16A1Q07092 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL16A1Q07092 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.08□□□□□ -1.92
COL16A1Q07092 AL157770.1-201ENST00000623049 439 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AL512506.2-201ENST00000624472 458 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.08□□□□□ -1.92
COL16A1Q07092 AC007671.2-201ENST00000637344 619 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL16A1Q07092 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 ZNF876P-202ENST00000398732 1485 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL16A1Q07092 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
COL16A1Q07092 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL16A1Q07092 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL16A1Q07092 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL16A1Q07092 RNA5SP27-201ENST00000363839 119 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL16A1Q07092 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.07□□□□□ -1.92
COL16A1Q07092 RNU6-224P-201ENST00000384055 107 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 RNU5A-2P-201ENST00000384337 116 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 SNORA67.3-201ENST00000384366 140 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 RNU6-636P-201ENST00000384598 107 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 RNU6-178P-201ENST00000384631 104 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AL008987.1-201ENST00000415528 237 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.07□□□□□ -1.92
COL16A1Q07092 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.07□□□□□ -1.92
COL16A1Q07092 NDUFB4P6-201ENST00000436819 366 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 THAP5P1-201ENST00000439089 262 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.07□□□□□ -1.92
COL16A1Q07092 RN7SL297P-201ENST00000483161 293 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 MTCYBP19-201ENST00000517463 1124 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 HMGB1P1-201ENST00000522557 636 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AP003033.1-201ENST00000527244 415 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AP003461.1-201ENST00000528866 78 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.07□□□□□ -1.92
COL16A1Q07092 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.07□□□□□ -1.92
COL16A1Q07092 RFPL1S-203ENST00000539579 330 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.07□□□□□ -1.92
COL16A1Q07092 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.07□□□□□ -1.92
COL16A1Q07092 AC025281.1-201ENST00000567026 265 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 ISCA1P3-201ENST00000577104 373 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.07□□□□□ -1.92
COL16A1Q07092 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.07□□□□□ -1.92
COL16A1Q07092 ZNF849P-201ENST00000594711 1566 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.07□□□□□ -1.92
COL16A1Q07092 AL353778.1-201ENST00000603149 408 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.07□□□□□ -1.92
COL16A1Q07092 MIR6766-201ENST00000622641 72 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
COL16A1Q07092 AC097714.1-201ENST00000511272 1647 ntBASIC3.07□□□□□ -1.92
COL16A1Q07092 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL16A1Q07092 MCTS2P-201ENST00000394552 546 ntBASIC3.06□□□□□ -1.92
COL16A1Q07092 BTF3P8-201ENST00000414577 526 ntBASIC3.06□□□□□ -1.92
COL16A1Q07092 MTND1P20-201ENST00000430341 950 ntBASIC3.06□□□□□ -1.92
COL16A1Q07092 NDUFA5P10-201ENST00000432147 357 ntBASIC3.06□□□□□ -1.92
COL16A1Q07092 MTCO3P5-201ENST00000433620 714 ntBASIC3.06□□□□□ -1.92
COL16A1Q07092 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.06□□□□□ -1.92
COL16A1Q07092 AL008629.1-201ENST00000438615 184 ntBASIC3.06□□□□□ -1.92
COL16A1Q07092 EEF1A1P39-201ENST00000440791 250 ntBASIC3.06□□□□□ -1.92
COL16A1Q07092 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.06□□□□□ -1.92
COL16A1Q07092 AC023512.1-201ENST00000444513 499 ntBASIC3.06□□□□□ -1.92
COL16A1Q07092 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.06□□□□□ -1.92
COL16A1Q07092 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms