Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPL23AP43-201ENST00000446445 471 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX6-1P78426 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX6-1P78426 AP000926.1-201ENST00000479573 241 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 AC092451.1-201ENST00000480211 153 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 RPL31P13-201ENST00000484151 370 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 RPS27AP13-201ENST00000498403 237 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX6-1P78426 AC015795.1-201ENST00000513669 327 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 SNORD60.2-201ENST00000516883 86 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX6-1P78426 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.05□□□□□ -1.76
NKX6-1P78426 MIR4775-201ENST00000581168 75 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX6-1P78426 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
NKX6-1P78426 AC025034.2-201ENST00000623264 286 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 AC009033.1-201ENST00000624279 431 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX6-1P78426 AL592182.3-201ENST00000642132 3304 ntBASIC4.05□□□□□ -1.76
NKX6-1P78426 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX6-1P78426 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX6-1P78426 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NKX6-1P78426 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NKX6-1P78426 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX6-1P78426 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NKX6-1P78426 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NKX6-1P78426 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX6-1P78426 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX6-1P78426 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
NKX6-1P78426 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 NACAP2-201ENST00000318548 624 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 MIR448-201ENST00000362131 111 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 RNU6-946P-201ENST00000383878 107 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 SNORA36C-201ENST00000384289 132 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 SNORA24.1-201ENST00000384401 135 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 SNORD37.1-201ENST00000390968 65 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AC114491.1-201ENST00000416095 246 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AC018630.2-202ENST00000422992 927 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.04□□□□□ -1.76
NKX6-1P78426 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.04□□□□□ -1.76
NKX6-1P78426 RPS29P15-201ENST00000458329 171 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 RPS20P20-201ENST00000460498 340 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 AC233702.1-201ENST00000482905 502 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 RPL36AP41-201ENST00000493820 306 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX6-1P78426 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX6-1P78426 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX6-1P78426 PCBP2P3-201ENST00000509726 843 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AL359273.1-201ENST00000510918 627 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 SNORA31.8-201ENST00000516327 108 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 MIR2116-201ENST00000517221 80 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX6-1P78426 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX6-1P78426 AP004242.1-201ENST00000533701 349 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX6-1P78426 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 HIF1AP1-201ENST00000553642 175 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AL121579.1-201ENST00000555129 305 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 RPL21P7-201ENST00000557463 483 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX6-1P78426 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 AC006270.2-201ENST00000578523 652 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AC174048.1-201ENST00000603389 144 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 MIR92B-201ENST00000607575 96 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AP002826.1-201ENST00000608835 315 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AP005019.3-201ENST00000620418 560 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AC079684.1-201ENST00000621405 437 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 C2orf27A-204ENST00000623058 969 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AC006065.6-201ENST00000625201 545 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX6-1P78426 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX6-1P78426 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX6-1P78426 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX6-1P78426 AC006971.1-201ENST00000407916 4486 ntBASIC4.04□□□□□ -1.76
NKX6-1P78426 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX6-1P78426 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX6-1P78426 CASC19-280ENST00000642102 1351 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX6-1P78426 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX6-1P78426 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX6-1P78426 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX6-1P78426 AC125257.1-201ENST00000560400 2930 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
NKX6-1P78426 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX6-1P78426 SNORA71.2-201ENST00000364941 134 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 RNU6-867P-201ENST00000364956 107 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 SMIM11P1-201ENST00000369586 178 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX6-1P78426 Y_RNA.390-201ENST00000383932 102 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 RNA5SP372-201ENST00000390836 115 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX6-1P78426 RNU2-29P-201ENST00000410423 189 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 RNU6-373P-201ENST00000411247 98 ntBASIC4.03□□□□□ -1.76
NKX6-1P78426 AC009237.5-201ENST00000414271 501 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms