Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 VN1R92P-201ENST00000598511 928 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AC078899.3-201ENST00000599065 212 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AF131215.7-201ENST00000602443 707 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AP001429.1-201ENST00000602568 530 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AC092953.2-201ENST00000608000 699 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AL450472.3-201ENST00000615578 367 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AL138880.2-201ENST00000616214 239 ntBASIC3.15□□□□□ -1.91
SRP54P61011 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRP54P61011 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.14□□□□□ -1.91
SRP54P61011 AC005832.2-201ENST00000538921 1430 ntBASIC3.14□□□□□ -1.91
SRP54P61011 OR1S2-201ENST00000302592 978 ntBASIC3.14□□□□□ -1.91
SRP54P61011 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
SRP54P61011 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SRP54P61011 RNU6-76P-201ENST00000384060 104 ntBASIC3.14□□□□□ -1.91
SRP54P61011 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
SRP54P61011 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP54P61011 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP54P61011 RPL21P40-201ENST00000428586 483 ntBASIC3.14□□□□□ -1.91
SRP54P61011 ZYG11AP1-201ENST00000430329 837 ntBASIC3.14□□□□□ -1.91
SRP54P61011 AC090774.1-201ENST00000435925 246 ntBASIC3.14□□□□□ -1.91
SRP54P61011 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.14□□□□□ -1.91
SRP54P61011 GAPDHP27-201ENST00000447427 1020 ntBASIC3.14□□□□□ -1.91
SRP54P61011 AL009048.1-201ENST00000450437 298 ntBASIC3.14□□□□□ -1.91
SRP54P61011 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP54P61011 AL049714.1-201ENST00000466686 347 ntBASIC3.14□□□□□ -1.91
SRP54P61011 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP54P61011 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SRP54P61011 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SRP54P61011 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP54P61011 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP54P61011 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP54P61011 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP54P61011 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.14□□□□□ -1.91
SRP54P61011 BNIP3P39-201ENST00000601077 554 ntBASIC3.14□□□□□ -1.91
SRP54P61011 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.14□□□□□ -1.91
SRP54P61011 AC006213.4-201ENST00000616184 634 ntBASIC3.14□□□□□ -1.91
SRP54P61011 OR4G3P-201ENST00000633500 913 ntBASIC3.14□□□□□ -1.91
SRP54P61011 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SRP54P61011 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SRP54P61011 AC004972.1-201ENST00000623934 2209 ntBASIC3.13□□□□□ -1.91
SRP54P61011 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.13□□□□□ -1.91
SRP54P61011 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SRP54P61011 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.13□□□□□ -1.91
SRP54P61011 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.13□□□□□ -1.91
SRP54P61011 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SRP54P61011 USP9YP33-201ENST00000412220 421 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
SRP54P61011 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.13□□□□□ -1.91
SRP54P61011 ELOCP9-201ENST00000418624 239 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.13□□□□□ -1.91
SRP54P61011 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.13□□□□□ -1.91
SRP54P61011 USP9YP35-201ENST00000435696 412 ntBASIC3.13□□□□□ -1.91
SRP54P61011 RPL21P2-201ENST00000440049 481 ntBASIC3.13□□□□□ -1.91
SRP54P61011 PTENP1-201ENST00000447117 1215 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AC140076.1-201ENST00000449897 361 ntBASIC3.13□□□□□ -1.91
SRP54P61011 MTND1P9-201ENST00000453775 944 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.13□□□□□ -1.91
SRP54P61011 MEMO1P3-201ENST00000459811 302 ntBASIC3.13□□□□□ -1.91
SRP54P61011 S100A11P2-201ENST00000467589 312 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AC021205.2-201ENST00000480069 347 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AC024589.1-201ENST00000512207 263 ntBASIC3.13□□□□□ -1.91
SRP54P61011 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.13□□□□□ -1.91
SRP54P61011 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
SRP54P61011 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.13□□□□□ -1.91
SRP54P61011 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.13□□□□□ -1.91
SRP54P61011 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.13□□□□□ -1.91
SRP54P61011 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
SRP54P61011 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.13□□□□□ -1.91
SRP54P61011 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
SRP54P61011 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.13□□□□□ -1.91
SRP54P61011 AC097478.2-201ENST00000610572 514 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AC131902.3-201ENST00000611767 581 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AC135507.2-201ENST00000612443 309 ntBASIC3.13□□□□□ -1.91
SRP54P61011 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SRP54P61011 MIR4275-201ENST00000636486 87 ntBASIC3.13□□□□□ -1.91
SRP54P61011 LRRC77P-213ENST00000637727 880 ntBASIC3.13□□□□□ -1.91
SRP54P61011 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SRP54P61011 AC011460.1-201ENST00000636268 1834 ntBASIC3.13□□□□□ -1.91
SRP54P61011 AP000776.1-201ENST00000530032 1663 ntBASIC3.13□□□□□ -1.91
SRP54P61011 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SRP54P61011 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
SRP54P61011 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
SRP54P61011 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRP54P61011 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRP54P61011 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.12□□□□□ -1.91
SRP54P61011 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SRP54P61011 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRP54P61011 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SRP54P61011 RNU6-97P-201ENST00000363387 104 ntBASIC3.12□□□□□ -1.91
SRP54P61011 SNORA14A-201ENST00000364773 135 ntBASIC3.12□□□□□ -1.91
SRP54P61011 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
SRP54P61011 RNU6-1242P-201ENST00000391052 103 ntBASIC3.12□□□□□ -1.91
SRP54P61011 AL138885.1-201ENST00000405921 675 ntBASIC3.12□□□□□ -1.91
SRP54P61011 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP54P61011 HSPE1P1-201ENST00000421494 318 ntBASIC3.12□□□□□ -1.91
SRP54P61011 AC234781.2-201ENST00000426370 994 ntBASIC3.12□□□□□ -1.91
SRP54P61011 AC244505.4-201ENST00000434905 287 ntBASIC3.12□□□□□ -1.91
SRP54P61011 YWHAZP7-201ENST00000436906 631 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms