Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.57□□□□□ -2
VSX2P58304 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
VSX2P58304 AP005901.5-201ENST00000545779 1796 ntBASIC2.57□□□□□ -2
VSX2P58304 AC062016.1-201ENST00000355719 319 ntBASIC2.57□□□□□ -2
VSX2P58304 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
VSX2P58304 SNORD56.5-201ENST00000364281 72 ntBASIC2.57□□□□□ -2
VSX2P58304 MIR135A2-201ENST00000384854 100 ntBASIC2.57□□□□□ -2
VSX2P58304 RNU6-298P-201ENST00000390888 96 ntBASIC2.57□□□□□ -2
VSX2P58304 MTCO1P56-201ENST00000401674 224 ntBASIC2.57□□□□□ -2
VSX2P58304 RPS15AP38-201ENST00000413110 372 ntBASIC2.57□□□□□ -2
VSX2P58304 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.57□□□□□ -2
VSX2P58304 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.57□□□□□ -2
VSX2P58304 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.57□□□□□ -2
VSX2P58304 AC019097.1-201ENST00000424783 735 ntBASIC2.57□□□□□ -2
VSX2P58304 MTCO1P3-201ENST00000429327 192 ntBASIC2.57□□□□□ -2
VSX2P58304 ARL5AP4-201ENST00000430731 512 ntBASIC2.57□□□□□ -2
VSX2P58304 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.57□□□□□ -2
VSX2P58304 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.57□□□□□ -2
VSX2P58304 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.57□□□□□ -2
VSX2P58304 RPL36AP6-201ENST00000435770 321 ntBASIC2.57□□□□□ -2
VSX2P58304 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.57□□□□□ -2
VSX2P58304 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.57□□□□□ -2
VSX2P58304 OR6K5P-201ENST00000447050 945 ntBASIC2.57□□□□□ -2
VSX2P58304 AC108938.1-201ENST00000451204 136 ntBASIC2.57□□□□□ -2
VSX2P58304 RNA5SP310-201ENST00000459084 116 ntBASIC2.57□□□□□ -2
VSX2P58304 AC008571.1-201ENST00000467232 300 ntBASIC2.57□□□□□ -2
VSX2P58304 AC090525.1-201ENST00000479116 478 ntBASIC2.57□□□□□ -2
VSX2P58304 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.57□□□□□ -2
VSX2P58304 RNU6-1028P-201ENST00000517164 93 ntBASIC2.57□□□□□ -2
VSX2P58304 AP003102.1-201ENST00000525638 661 ntBASIC2.57□□□□□ -2
VSX2P58304 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.57□□□□□ -2
VSX2P58304 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.57□□□□□ -2
VSX2P58304 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.57□□□□□ -2
VSX2P58304 DNAJC8P1-201ENST00000554535 372 ntBASIC2.57□□□□□ -2
VSX2P58304 AC106028.5-201ENST00000610332 395 ntBASIC2.57□□□□□ -2
VSX2P58304 AC010872.1-201ENST00000624225 675 ntBASIC2.57□□□□□ -2
VSX2P58304 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.57□□□□□ -2
VSX2P58304 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.57□□□□□ -2
VSX2P58304 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.57□□□□□ -2
VSX2P58304 Z99496.1-201ENST00000469424 1477 ntBASIC2.57□□□□□ -2
VSX2P58304 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.57□□□□□ -2
VSX2P58304 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VSX2P58304 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
VSX2P58304 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VSX2P58304 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VSX2P58304 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
VSX2P58304 VTRNA1-1-201ENST00000363120 99 ntBASIC2.56□□□□□ -2
VSX2P58304 RNU6-1155P-201ENST00000363554 107 ntBASIC2.56□□□□□ -2
VSX2P58304 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
VSX2P58304 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
VSX2P58304 Y_RNA.548-201ENST00000384656 105 ntBASIC2.56□□□□□ -2
VSX2P58304 MIR196B-201ENST00000384852 84 ntBASIC2.56□□□□□ -2
VSX2P58304 AL356057.3-201ENST00000402607 340 ntBASIC2.56□□□□□ -2
VSX2P58304 AL136372.1-201ENST00000403060 228 ntBASIC2.56□□□□□ -2
VSX2P58304 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.56□□□□□ -2
VSX2P58304 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.56□□□□□ -2
VSX2P58304 NUP35P1-201ENST00000422734 947 ntBASIC2.56□□□□□ -2
VSX2P58304 DPRXP1-201ENST00000426312 460 ntBASIC2.56□□□□□ -2
VSX2P58304 AL590233.1-201ENST00000430017 456 ntBASIC2.56□□□□□ -2
VSX2P58304 GTF2IP7-202ENST00000436677 309 ntBASIC2.56□□□□□ -2
VSX2P58304 RAC1P7-201ENST00000445367 377 ntBASIC2.56□□□□□ -2
VSX2P58304 RPL39P6-201ENST00000448289 150 ntBASIC2.56□□□□□ -2
VSX2P58304 AL353691.1-201ENST00000451332 387 ntBASIC2.56□□□□□ -2
VSX2P58304 RFC5P1-201ENST00000454419 874 ntBASIC2.56□□□□□ -2
VSX2P58304 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.56□□□□□ -2
VSX2P58304 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.56□□□□□ -2
VSX2P58304 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.56□□□□□ -2
VSX2P58304 RPL31P50-201ENST00000471002 296 ntBASIC2.56□□□□□ -2
VSX2P58304 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
VSX2P58304 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.56□□□□□ -2
VSX2P58304 AC104629.1-201ENST00000494226 508 ntBASIC2.56□□□□□ -2
VSX2P58304 AC008427.1-201ENST00000503102 655 ntBASIC2.56□□□□□ -2
VSX2P58304 KLRA1P-201ENST00000503499 986 ntBASIC2.56□□□□□ -2
VSX2P58304 COX7A2P2-201ENST00000505291 250 ntBASIC2.56□□□□□ -2
VSX2P58304 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.56□□□□□ -2
VSX2P58304 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.56□□□□□ -2
VSX2P58304 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.56□□□□□ -2
VSX2P58304 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.56□□□□□ -2
VSX2P58304 AP001189.2-201ENST00000527320 189 ntBASIC2.56□□□□□ -2
VSX2P58304 AL133271.1-201ENST00000538229 291 ntBASIC2.56□□□□□ -2
VSX2P58304 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
VSX2P58304 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.56□□□□□ -2
VSX2P58304 AC126365.2-201ENST00000580630 379 ntBASIC2.56□□□□□ -2
VSX2P58304 AL390838.2-201ENST00000602394 274 ntBASIC2.56□□□□□ -2
VSX2P58304 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.56□□□□□ -2
VSX2P58304 AL356585.4-201ENST00000623078 1229 ntBASIC2.56□□□□□ -2
VSX2P58304 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.56□□□□□ -2
VSX2P58304 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VSX2P58304 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.55□□□□□ -2
VSX2P58304 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
VSX2P58304 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
VSX2P58304 RNU6-878P-201ENST00000384578 110 ntBASIC2.55□□□□□ -2
VSX2P58304 MIR493-201ENST00000385254 89 ntBASIC2.55□□□□□ -2
VSX2P58304 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.55□□□□□ -2
VSX2P58304 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.55□□□□□ -2
VSX2P58304 EZH2P1-201ENST00000431167 291 ntBASIC2.55□□□□□ -2
VSX2P58304 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.55□□□□□ -2
VSX2P58304 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.55□□□□□ -2
VSX2P58304 MTCYBP45-201ENST00000435243 565 ntBASIC2.55□□□□□ -2
VSX2P58304 SNRPEP4-201ENST00000435815 279 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms