Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC005297.2-201ENST00000450430 606 ntBASIC3.21□□□□□ -1.9
PEX3P56589 RPS20P24-201ENST00000457473 361 ntBASIC3.21□□□□□ -1.9
PEX3P56589 snoU109.4-201ENST00000458953 143 ntBASIC3.21□□□□□ -1.9
PEX3P56589 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.21□□□□□ -1.9
PEX3P56589 RPL31P50-201ENST00000471002 296 ntBASIC3.21□□□□□ -1.9
PEX3P56589 NCOR1P1-202ENST00000486162 291 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.21□□□□□ -1.9
PEX3P56589 AC083906.5-201ENST00000503722 328 ntBASIC3.21□□□□□ -1.9
PEX3P56589 HMGB1P22-201ENST00000505315 124 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.21□□□□□ -1.9
PEX3P56589 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.21□□□□□ -1.9
PEX3P56589 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.21□□□□□ -1.9
PEX3P56589 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.21□□□□□ -1.9
PEX3P56589 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.21□□□□□ -1.9
PEX3P56589 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.21□□□□□ -1.9
PEX3P56589 AC008751.2-201ENST00000597885 980 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AC024560.3-201ENST00000608482 349 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AL445264.1-201ENST00000621719 171 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AC120349.3-201ENST00000624377 529 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AC091925.2-201ENST00000625059 256 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AC019226.2-201ENST00000625973 424 ntBASIC3.21□□□□□ -1.9
PEX3P56589 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
PEX3P56589 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PEX3P56589 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PEX3P56589 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PEX3P56589 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PEX3P56589 AC097714.1-201ENST00000511272 1647 ntBASIC3.2□□□□□ -1.9
PEX3P56589 RNVU1-3-201ENST00000364313 161 ntBASIC3.2□□□□□ -1.9
PEX3P56589 RNU6-335P-201ENST00000364563 113 ntBASIC3.2□□□□□ -1.9
PEX3P56589 RNU6-629P-201ENST00000384061 103 ntBASIC3.2□□□□□ -1.9
PEX3P56589 RNU6-878P-201ENST00000384578 110 ntBASIC3.2□□□□□ -1.9
PEX3P56589 RNU6-952P-201ENST00000391164 108 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AL121972.1-201ENST00000402023 252 ntBASIC3.2□□□□□ -1.9
PEX3P56589 USP9YP33-201ENST00000412220 421 ntBASIC3.2□□□□□ -1.9
PEX3P56589 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.2□□□□□ -1.9
PEX3P56589 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 RPL7P30-201ENST00000420888 709 ntBASIC3.2□□□□□ -1.9
PEX3P56589 USP9YP35-201ENST00000435696 412 ntBASIC3.2□□□□□ -1.9
PEX3P56589 MUPP-201ENST00000438111 566 ntBASIC3.2□□□□□ -1.9
PEX3P56589 MTND1P31-201ENST00000449206 961 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AL109741.2-201ENST00000455561 343 ntBASIC3.2□□□□□ -1.9
PEX3P56589 RPL21P41-201ENST00000459863 264 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC068587.2-201ENST00000478386 781 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 AC005921.1-201ENST00000510589 286 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 AC026412.2-201ENST00000512270 1075 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.2□□□□□ -1.9
PEX3P56589 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.2□□□□□ -1.9
PEX3P56589 AP003461.1-201ENST00000528866 78 ntBASIC3.2□□□□□ -1.9
PEX3P56589 OR7K1P-201ENST00000546439 926 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC107016.2-201ENST00000547968 190 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.2□□□□□ -1.9
PEX3P56589 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX3P56589 AC010928.3-201ENST00000587712 541 ntBASIC3.2□□□□□ -1.9
PEX3P56589 VN1R92P-201ENST00000598511 928 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AL596327.1-201ENST00000603629 213 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC018714.1-201ENST00000605028 208 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AL160281.1-201ENST00000605307 311 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AL360219.1-201ENST00000610230 366 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AL357080.1-201ENST00000617394 239 ntBASIC3.2□□□□□ -1.9
PEX3P56589 U73479.1-201ENST00000618062 168 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC097520.1-201ENST00000624435 385 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC009039.2-201ENST00000624524 529 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AL137790.1-201ENST00000634283 177 ntBASIC3.2□□□□□ -1.9
PEX3P56589 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.2□□□□□ -1.9
PEX3P56589 AC007256.1-201ENST00000392253 2765 ntBASIC3.2□□□□□ -1.9
PEX3P56589 AC093831.2-201ENST00000624393 3427 ntBASIC3.2□□□□□ -1.9
PEX3P56589 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PEX3P56589 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
PEX3P56589 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PEX3P56589 SNORA31-201ENST00000362607 130 ntBASIC3.19□□□□□ -1.9
PEX3P56589 RNA5SP258-201ENST00000362750 119 ntBASIC3.19□□□□□ -1.9
PEX3P56589 RNU6-433P-201ENST00000363216 104 ntBASIC3.19□□□□□ -1.9
PEX3P56589 RNU6-1200P-201ENST00000384162 107 ntBASIC3.19□□□□□ -1.9
PEX3P56589 RNU6-851P-201ENST00000384565 107 ntBASIC3.19□□□□□ -1.9
PEX3P56589 CYCSP45-201ENST00000402289 315 ntBASIC3.19□□□□□ -1.9
PEX3P56589 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.19□□□□□ -1.9
PEX3P56589 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX3P56589 AL022400.1-201ENST00000423946 935 ntBASIC3.19□□□□□ -1.9
PEX3P56589 AL590233.1-201ENST00000430017 456 ntBASIC3.19□□□□□ -1.9
PEX3P56589 ZYG11AP1-201ENST00000430329 837 ntBASIC3.19□□□□□ -1.9
PEX3P56589 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
PEX3P56589 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX3P56589 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX3P56589 DSTNP2-201ENST00000504533 515 ntBASIC3.19□□□□□ -1.9
PEX3P56589 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.19□□□□□ -1.9
PEX3P56589 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX3P56589 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
PEX3P56589 SNORA3.4-201ENST00000515969 96 ntBASIC3.19□□□□□ -1.9
PEX3P56589 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX3P56589 COX6CP8-201ENST00000522620 226 ntBASIC3.19□□□□□ -1.9
PEX3P56589 FAM60DP-201ENST00000524174 632 ntBASIC3.19□□□□□ -1.9
PEX3P56589 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.19□□□□□ -1.9
PEX3P56589 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms