Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX1P55347 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.76□□□□□ -1.97
PKNOX1P55347 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.76□□□□□ -1.97
PKNOX1P55347 MTCO3P13-201ENST00000577757 781 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 DUXAP4-201ENST00000603046 613 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 AC021749.1-201ENST00000604322 607 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.76□□□□□ -1.97
PKNOX1P55347 AC107075.1-201ENST00000613695 314 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PKNOX1P55347 AC010608.3-201ENST00000625048 527 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PKNOX1P55347 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX1P55347 AL022578.1-201ENST00000439330 1433 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AC092593.1-201ENST00000515413 1815 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
PKNOX1P55347 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.75□□□□□ -1.97
PKNOX1P55347 FRG1BP-201ENST00000278882 761 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 RNU6-952P-201ENST00000391164 108 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 RPL23AP29-201ENST00000397284 453 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AL031679.1-201ENST00000400616 525 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 RNU2-43P-201ENST00000410306 190 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 RPL19P1-201ENST00000411635 428 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AL139421.1-201ENST00000423010 169 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.75□□□□□ -1.97
PKNOX1P55347 AC024082.2-201ENST00000434771 238 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 SDCBPP1-201ENST00000440192 890 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 MRPL50P4-201ENST00000446432 475 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AL031313.1-201ENST00000448435 256 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 NIPA2P5-201ENST00000452282 464 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.75□□□□□ -1.97
PKNOX1P55347 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.75□□□□□ -1.97
PKNOX1P55347 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.75□□□□□ -1.97
PKNOX1P55347 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.75□□□□□ -1.97
PKNOX1P55347 RPL30P14-201ENST00000482744 348 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PKNOX1P55347 AC021146.8-201ENST00000507455 733 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AC117522.3-201ENST00000507974 584 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.75□□□□□ -1.97
PKNOX1P55347 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.75□□□□□ -1.97
PKNOX1P55347 AC109464.2-201ENST00000510242 943 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.75□□□□□ -1.97
PKNOX1P55347 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.75□□□□□ -1.97
PKNOX1P55347 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.75□□□□□ -1.97
PKNOX1P55347 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.75□□□□□ -1.97
PKNOX1P55347 AC023813.2-201ENST00000564321 469 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PKNOX1P55347 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.75□□□□□ -1.97
PKNOX1P55347 AL136370.1-201ENST00000608166 691 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AC005046.1-201ENST00000608515 625 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AP000676.4-201ENST00000624659 623 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
PKNOX1P55347 AL356473.1-201ENST00000406203 1408 ntBASIC2.75□□□□□ -1.97
PKNOX1P55347 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.75□□□□□ -1.97
PKNOX1P55347 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PKNOX1P55347 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.75□□□□□ -1.97
PKNOX1P55347 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.74□□□□□ -1.97
PKNOX1P55347 AL079343.1-201ENST00000572358 1771 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PKNOX1P55347 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PKNOX1P55347 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PKNOX1P55347 Y_RNA.192-201ENST00000363977 102 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 RNU6-621P-201ENST00000364752 109 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 RPS3AP24-201ENST00000407896 734 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 TIMM9P2-201ENST00000419324 266 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.74□□□□□ -1.97
PKNOX1P55347 MTCO2P5-201ENST00000422621 426 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 RPL27AP8-201ENST00000424277 446 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 HSFY7P-201ENST00000432672 318 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 RPL36AP6-201ENST00000435770 321 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 HSFY8P-201ENST00000437934 318 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 MTND4P6-201ENST00000438297 472 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.74□□□□□ -1.97
PKNOX1P55347 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.74□□□□□ -1.97
PKNOX1P55347 RPL23AP20-201ENST00000447965 421 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.74□□□□□ -1.97
PKNOX1P55347 HSFY5P-201ENST00000453726 309 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AC005410.1-202ENST00000460347 485 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AC097493.1-201ENST00000463958 372 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AC003982.1-202ENST00000469928 248 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 RPL31P50-201ENST00000471002 296 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AC134050.1-201ENST00000495088 933 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.74□□□□□ -1.97
PKNOX1P55347 MTATP6P9-201ENST00000515039 680 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 SCGB1D5P-201ENST00000515134 247 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 SCARNA13-201ENST00000516672 275 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.74□□□□□ -1.97
PKNOX1P55347 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.74□□□□□ -1.97
PKNOX1P55347 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.74□□□□□ -1.97
PKNOX1P55347 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.74□□□□□ -1.97
PKNOX1P55347 AP001269.3-201ENST00000588718 329 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.74□□□□□ -1.97
PKNOX1P55347 AC091057.2-201ENST00000602594 792 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AC013444.2-201ENST00000603317 787 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AL139022.2-201ENST00000606934 443 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AC131235.4-201ENST00000609288 620 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms