Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAM27D1-201ENST00000612308 341 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AC100793.4-201ENST00000613683 429 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.77□□□□□ -1.81
NR1H2P55055 AC012150.2-201ENST00000621300 544 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AL603839.4-201ENST00000624658 1005 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AC010149.2-201ENST00000637608 315 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H2P55055 TEX21P-201ENST00000447107 1476 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 CEP170P1-201ENST00000502249 4587 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NR1H2P55055 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H2P55055 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H2P55055 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H2P55055 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.77□□□□□ -1.81
NR1H2P55055 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H2P55055 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H2P55055 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H2P55055 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H2P55055 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NR1H2P55055 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H2P55055 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H2P55055 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
NR1H2P55055 RN7SKP280-201ENST00000364196 304 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 SNORA36C-201ENST00000384289 132 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NR1H2P55055 SNORA40.3-201ENST00000390964 122 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 RPS20P2-201ENST00000402520 389 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 RPL7P25-201ENST00000404151 721 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AL445189.1-201ENST00000405722 338 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 HSPE1P8-201ENST00000406997 288 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 RNU2-62P-201ENST00000410868 191 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AL663109.1-201ENST00000411498 844 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 MTCO3P41-201ENST00000414801 328 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AC108032.1-201ENST00000416706 207 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.76□□□□□ -1.81
NR1H2P55055 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H2P55055 NDUFB4P7-201ENST00000423198 363 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.76□□□□□ -1.81
NR1H2P55055 USP12PX-201ENST00000432383 1057 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H2P55055 BTF3P10-201ENST00000433415 495 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 RPL23AP52-201ENST00000439311 478 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AL049734.2-201ENST00000441066 616 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.76□□□□□ -1.81
NR1H2P55055 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H2P55055 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.76□□□□□ -1.81
NR1H2P55055 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H2P55055 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H2P55055 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H2P55055 RNU1-45P-201ENST00000517191 141 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 PAICSP4-201ENST00000517543 1253 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H2P55055 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H2P55055 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H2P55055 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H2P55055 AL355836.1-201ENST00000555951 870 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 ZNF519P3-201ENST00000557158 1032 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H2P55055 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H2P55055 AGGF1P4-201ENST00000568249 801 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AL356432.3-201ENST00000568952 465 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 BNIP3P8-201ENST00000597863 560 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 KC877982.1-201ENST00000602313 470 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AC012557.2-201ENST00000605919 418 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H2P55055 AC002076.2-201ENST00000617362 122 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AC009159.1-201ENST00000618386 642 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.76□□□□□ -1.81
NR1H2P55055 AC098679.4-201ENST00000624241 654 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H2P55055 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.76□□□□□ -1.81
NR1H2P55055 AL353746.1-201ENST00000566293 6881 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H2P55055 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NR1H2P55055 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.76□□□□□ -1.81
NR1H2P55055 LARP1BP1-201ENST00000506036 1359 ntBASIC3.76□□□□□ -1.81
NR1H2P55055 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H2P55055 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NR1H2P55055 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H2P55055 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H2P55055 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
NR1H2P55055 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NR1H2P55055 RPL7P26-201ENST00000333817 754 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H2P55055 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.75□□□□□ -1.81
NR1H2P55055 SNORA1.3-201ENST00000384676 136 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 MIR493-201ENST00000385254 89 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NR1H2P55055 AC110754.1-201ENST00000399740 601 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 Y_RNA.608-201ENST00000410647 95 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 AC078974.1-201ENST00000411597 223 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.75□□□□□ -1.81
NR1H2P55055 USP9YP13-201ENST00000417797 480 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 RPL7P2-201ENST00000427639 268 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H2P55055 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H2P55055 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H2P55055 FTH1P1-201ENST00000437933 532 ntBASIC3.75□□□□□ -1.81
NR1H2P55055 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms