Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS2P54868 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS2P54868 AC130650.2-201ENST00000618736 2403 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HMGCS2P54868 MTND4P34-201ENST00000572715 1371 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS2P54868 SNRPEP3-201ENST00000338402 276 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 SNORA51.6-201ENST00000384151 125 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 MIR591-201ENST00000385290 95 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 RPL31P1-201ENST00000398116 372 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 RNU6-757P-201ENST00000410334 100 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 RNU2-28P-201ENST00000410457 189 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS2P54868 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS2P54868 AL139421.1-201ENST00000423010 169 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS2P54868 ARF4P2-201ENST00000430209 526 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 MTATP6P17-201ENST00000431030 672 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 MTND1P26-201ENST00000440488 538 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 RPL23AP16-201ENST00000441715 421 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 RPL7P52-201ENST00000449200 742 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCS2P54868 TRGVB-201ENST00000453257 471 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS2P54868 snoU13.3-201ENST00000459441 104 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 MTND2P14-201ENST00000482139 351 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 OR4G11P-201ENST00000492842 939 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS2P54868 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.17□□□□□ -1.9
HMGCS2P54868 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS2P54868 RNY4P37-201ENST00000516225 96 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HMGCS2P54868 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.17□□□□□ -1.9
HMGCS2P54868 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS2P54868 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS2P54868 AC087465.1-201ENST00000560574 245 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS2P54868 AL354943.1-201ENST00000572103 781 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AC104984.5-201ENST00000586878 94 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS2P54868 AL355812.1-201ENST00000603215 216 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 DPRXP5-201ENST00000604662 539 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS2P54868 TUSC7.1-201ENST00000610969 165 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AL139418.1-201ENST00000613613 177 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AC008083.4-201ENST00000615076 444 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AC092650.2-201ENST00000619984 902 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 AC017037.3-201ENST00000625016 472 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 MIR7153-201ENST00000637758 57 ntBASIC3.17□□□□□ -1.9
HMGCS2P54868 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HMGCS2P54868 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS2P54868 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HMGCS2P54868 CDR1-202ENST00000625883 1485 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS2P54868 RNU6-50P-201ENST00000362356 103 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 Y_RNA.311-201ENST00000365068 96 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 Y_RNA.493-201ENST00000384422 102 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 AL139039.1-201ENST00000401900 692 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS2P54868 AL133384.1-201ENST00000412744 351 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 OFD1P18Y-201ENST00000420889 959 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS2P54868 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 MTND2P20-201ENST00000440805 661 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 MTND3P1-201ENST00000441336 220 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AC098826.2-201ENST00000452011 651 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AC010301.1-201ENST00000473936 355 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS2P54868 AL024509.2-201ENST00000493462 493 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
HMGCS2P54868 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS2P54868 AC010587.2-201ENST00000511727 448 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AC008413.1-201ENST00000511864 177 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AC109445.1-201ENST00000512356 383 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AC096725.1-201ENST00000514266 313 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 IGKV2D-36-201ENST00000518643 226 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 OR4A45P-201ENST00000529954 901 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 ZNF705CP-201ENST00000530515 889 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS2P54868 AL512310.1-201ENST00000548639 172 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS2P54868 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 AL158042.1-201ENST00000605338 460 ntBASIC3.16□□□□□ -1.9
HMGCS2P54868 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS2P54868 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
HMGCS2P54868 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS2P54868 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS2P54868 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS2P54868 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HMGCS2P54868 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS2P54868 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS2P54868 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS2P54868 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HMGCS2P54868 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms