Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.14□□□□□ -1.75
COPAP53621 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COPAP53621 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.14□□□□□ -1.75
COPAP53621 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.14□□□□□ -1.75
COPAP53621 MTCO3P20-201ENST00000454926 688 ntBASIC4.14□□□□□ -1.75
COPAP53621 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.14□□□□□ -1.75
COPAP53621 AC093278.1-201ENST00000494700 600 ntBASIC4.14□□□□□ -1.75
COPAP53621 RNU6-314P-201ENST00000516574 104 ntBASIC4.14□□□□□ -1.75
COPAP53621 IGKV2-23-201ENST00000518729 323 ntBASIC4.14□□□□□ -1.75
COPAP53621 IGKV2D-19-201ENST00000523346 262 ntBASIC4.14□□□□□ -1.75
COPAP53621 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.14□□□□□ -1.75
COPAP53621 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.14□□□□□ -1.75
COPAP53621 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.14□□□□□ -1.75
COPAP53621 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.14□□□□□ -1.75
COPAP53621 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.14□□□□□ -1.75
COPAP53621 AC099489.2-201ENST00000574976 260 ntBASIC4.14□□□□□ -1.75
COPAP53621 COX6CP3-201ENST00000580869 223 ntBASIC4.14□□□□□ -1.75
COPAP53621 MIR3118-1-201ENST00000581787 76 ntBASIC4.14□□□□□ -1.75
COPAP53621 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.14□□□□□ -1.75
COPAP53621 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.14□□□□□ -1.75
COPAP53621 AL606490.9-201ENST00000603331 271 ntBASIC4.14□□□□□ -1.75
COPAP53621 AC245014.2-201ENST00000603689 287 ntBASIC4.14□□□□□ -1.75
COPAP53621 AC246785.4-201ENST00000605374 287 ntBASIC4.14□□□□□ -1.75
COPAP53621 HMGB1P50-201ENST00000605814 607 ntBASIC4.14□□□□□ -1.75
COPAP53621 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.14□□□□□ -1.75
COPAP53621 AC007038.2-201ENST00000608095 740 ntBASIC4.14□□□□□ -1.75
COPAP53621 AC007684.1-201ENST00000609671 477 ntBASIC4.14□□□□□ -1.75
COPAP53621 U4.5-201ENST00000617137 123 ntBASIC4.14□□□□□ -1.75
COPAP53621 MIR6500-201ENST00000622700 86 ntBASIC4.14□□□□□ -1.75
COPAP53621 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.14□□□□□ -1.75
COPAP53621 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.14□□□□□ -1.75
COPAP53621 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
COPAP53621 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.14□□□□□ -1.75
COPAP53621 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COPAP53621 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COPAP53621 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COPAP53621 AC005832.2-201ENST00000538921 1430 ntBASIC4.13□□□□□ -1.75
COPAP53621 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.13□□□□□ -1.75
COPAP53621 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COPAP53621 RNY4P16-201ENST00000364768 94 ntBASIC4.13□□□□□ -1.75
COPAP53621 RNA5SP235-201ENST00000365411 114 ntBASIC4.13□□□□□ -1.75
COPAP53621 RNU1-89P-201ENST00000384592 164 ntBASIC4.13□□□□□ -1.75
COPAP53621 MIR135A2-201ENST00000384854 100 ntBASIC4.13□□□□□ -1.75
COPAP53621 MIR19A-201ENST00000384878 82 ntBASIC4.13□□□□□ -1.75
COPAP53621 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.13□□□□□ -1.75
COPAP53621 AC127391.1-201ENST00000411737 98 ntBASIC4.13□□□□□ -1.75
COPAP53621 MTND1P21-201ENST00000412991 285 ntBASIC4.13□□□□□ -1.75
COPAP53621 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.13□□□□□ -1.75
COPAP53621 AC099677.1-201ENST00000420575 175 ntBASIC4.13□□□□□ -1.75
COPAP53621 USP9YP36-201ENST00000424581 829 ntBASIC4.13□□□□□ -1.75
COPAP53621 AL691449.1-201ENST00000426570 421 ntBASIC4.13□□□□□ -1.75
COPAP53621 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.13□□□□□ -1.75
COPAP53621 AC119618.1-201ENST00000434191 222 ntBASIC4.13□□□□□ -1.75
COPAP53621 USP9YP15-201ENST00000442391 422 ntBASIC4.13□□□□□ -1.75
COPAP53621 RPS4XP4-201ENST00000443195 763 ntBASIC4.13□□□□□ -1.75
COPAP53621 AL121871.1-201ENST00000443413 436 ntBASIC4.13□□□□□ -1.75
COPAP53621 AC007967.1-201ENST00000455422 1159 ntBASIC4.13□□□□□ -1.75
COPAP53621 AP002812.1-201ENST00000495378 474 ntBASIC4.13□□□□□ -1.75
COPAP53621 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.13□□□□□ -1.75
COPAP53621 KCTD9P5-201ENST00000504141 1170 ntBASIC4.13□□□□□ -1.75
COPAP53621 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.13□□□□□ -1.75
COPAP53621 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.13□□□□□ -1.75
COPAP53621 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.13□□□□□ -1.75
COPAP53621 AC107934.1-201ENST00000522215 217 ntBASIC4.13□□□□□ -1.75
COPAP53621 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.13□□□□□ -1.75
COPAP53621 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.13□□□□□ -1.75
COPAP53621 OR4T1P-201ENST00000554933 911 ntBASIC4.13□□□□□ -1.75
COPAP53621 HSPE1P5-201ENST00000561489 272 ntBASIC4.13□□□□□ -1.75
COPAP53621 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.13□□□□□ -1.75
COPAP53621 MIR3146-201ENST00000580367 79 ntBASIC4.13□□□□□ -1.75
COPAP53621 SNORD84-203ENST00000584275 78 ntBASIC4.13□□□□□ -1.75
COPAP53621 MIR5684-201ENST00000585074 65 ntBASIC4.13□□□□□ -1.75
COPAP53621 BNIP3P33-201ENST00000598912 569 ntBASIC4.13□□□□□ -1.75
COPAP53621 AP000860.1-201ENST00000605250 559 ntBASIC4.13□□□□□ -1.75
COPAP53621 AC004908.2-201ENST00000609090 574 ntBASIC4.13□□□□□ -1.75
COPAP53621 AC128687.2-201ENST00000609657 566 ntBASIC4.13□□□□□ -1.75
COPAP53621 AL161734.1-201ENST00000609720 557 ntBASIC4.13□□□□□ -1.75
COPAP53621 AL133173.2-201ENST00000614270 90 ntBASIC4.13□□□□□ -1.75
COPAP53621 AL158209.2-201ENST00000619266 216 ntBASIC4.13□□□□□ -1.75
COPAP53621 AC136475.10-201ENST00000620253 385 ntBASIC4.13□□□□□ -1.75
COPAP53621 AL732618.1-201ENST00000623251 301 ntBASIC4.13□□□□□ -1.75
COPAP53621 AC068880.5-201ENST00000624331 290 ntBASIC4.13□□□□□ -1.75
COPAP53621 AC244258.1-201ENST00000637553 1071 ntBASIC4.13□□□□□ -1.75
COPAP53621 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
COPAP53621 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COPAP53621 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COPAP53621 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPAP53621 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
COPAP53621 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
COPAP53621 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
COPAP53621 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPAP53621 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.12□□□□□ -1.75
COPAP53621 RNA5SP322-201ENST00000363617 119 ntBASIC4.12□□□□□ -1.75
COPAP53621 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPAP53621 RNU6-637P-201ENST00000384050 107 ntBASIC4.12□□□□□ -1.75
COPAP53621 RNU6-629P-201ENST00000384061 103 ntBASIC4.12□□□□□ -1.75
COPAP53621 RPL23AP32-201ENST00000395315 459 ntBASIC4.12□□□□□ -1.75
COPAP53621 GSTA9P-201ENST00000406231 611 ntBASIC4.12□□□□□ -1.75
COPAP53621 AP000567.1-201ENST00000406413 156 ntBASIC4.12□□□□□ -1.75
COPAP53621 RPS15AP12-201ENST00000419498 388 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms