Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 HMGB1P1-201ENST00000522557 636 ntBASIC3.11□□□□□ -1.91
MSH6P52701 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.11□□□□□ -1.91
MSH6P52701 OR8K4P-201ENST00000534608 872 ntBASIC3.11□□□□□ -1.91
MSH6P52701 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.11□□□□□ -1.91
MSH6P52701 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.11□□□□□ -1.91
MSH6P52701 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.11□□□□□ -1.91
MSH6P52701 AL590396.4-201ENST00000636779 956 ntBASIC3.11□□□□□ -1.91
MSH6P52701 FAM35CP-201ENST00000554755 2470 ntBASIC3.1□□□□□ -1.91
MSH6P52701 AC006378.2-201ENST00000623178 2476 ntBASIC3.1□□□□□ -1.91
MSH6P52701 MTND5P31-201ENST00000419366 1374 ntBASIC3.1□□□□□ -1.91
MSH6P52701 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.1□□□□□ -1.91
MSH6P52701 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
MSH6P52701 WWP1P1-201ENST00000466609 2769 ntBASIC3.1□□□□□ -1.91
MSH6P52701 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
MSH6P52701 ZNF355P-201ENST00000427301 3216 ntBASIC3.1□□□□□ -1.91
MSH6P52701 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.1□□□□□ -1.91
MSH6P52701 RNU6-619P-201ENST00000365146 108 ntBASIC3.1□□□□□ -1.91
MSH6P52701 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
MSH6P52701 RNU6-207P-201ENST00000384137 107 ntBASIC3.1□□□□□ -1.91
MSH6P52701 RNU6-1226P-201ENST00000384317 107 ntBASIC3.1□□□□□ -1.91
MSH6P52701 MIR16-1-201ENST00000385271 89 ntBASIC3.1□□□□□ -1.91
MSH6P52701 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.1□□□□□ -1.91
MSH6P52701 AC244098.2-201ENST00000422068 99 ntBASIC3.1□□□□□ -1.91
MSH6P52701 AL353729.1-201ENST00000425044 720 ntBASIC3.1□□□□□ -1.91
MSH6P52701 RPP40P1-201ENST00000426762 456 ntBASIC3.1□□□□□ -1.91
MSH6P52701 FO393414.1-201ENST00000428697 1184 ntBASIC3.1□□□□□ -1.91
MSH6P52701 AC092427.1-202ENST00000430569 476 ntBASIC3.1□□□□□ -1.91
MSH6P52701 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.1□□□□□ -1.91
MSH6P52701 ELOCP13-201ENST00000443934 329 ntBASIC3.1□□□□□ -1.91
MSH6P52701 HMGN3P1-201ENST00000453847 193 ntBASIC3.1□□□□□ -1.91
MSH6P52701 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.1□□□□□ -1.91
MSH6P52701 RPS27P27-201ENST00000498779 255 ntBASIC3.1□□□□□ -1.91
MSH6P52701 RNF138P1-201ENST00000502765 546 ntBASIC3.1□□□□□ -1.91
MSH6P52701 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.1□□□□□ -1.91
MSH6P52701 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.1□□□□□ -1.91
MSH6P52701 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.1□□□□□ -1.91
MSH6P52701 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.1□□□□□ -1.91
MSH6P52701 OR4G1P-201ENST00000588632 938 ntBASIC3.1□□□□□ -1.91
MSH6P52701 HSPE1P14-201ENST00000605812 302 ntBASIC3.1□□□□□ -1.91
MSH6P52701 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.1□□□□□ -1.91
MSH6P52701 AC078880.5-201ENST00000617845 421 ntBASIC3.1□□□□□ -1.91
MSH6P52701 AC010378.1-201ENST00000619270 362 ntBASIC3.1□□□□□ -1.91
MSH6P52701 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.09□□□□□ -1.91
MSH6P52701 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
MSH6P52701 RNU6-353P-201ENST00000364266 108 ntBASIC3.09□□□□□ -1.92
MSH6P52701 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
MSH6P52701 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.09□□□□□ -1.92
MSH6P52701 RNU6-444P-201ENST00000383988 108 ntBASIC3.09□□□□□ -1.92
MSH6P52701 UBE2V1P9-201ENST00000414760 368 ntBASIC3.09□□□□□ -1.92
MSH6P52701 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
MSH6P52701 AC124916.1-201ENST00000444020 547 ntBASIC3.09□□□□□ -1.92
MSH6P52701 NAP1L1P3-201ENST00000462291 880 ntBASIC3.09□□□□□ -1.92
MSH6P52701 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.09□□□□□ -1.92
MSH6P52701 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
MSH6P52701 AC104986.1-201ENST00000517978 436 ntBASIC3.09□□□□□ -1.92
MSH6P52701 GNAI2P1-201ENST00000541815 315 ntBASIC3.09□□□□□ -1.92
MSH6P52701 AC006518.2-201ENST00000542513 940 ntBASIC3.09□□□□□ -1.92
MSH6P52701 NIFKP8-201ENST00000560500 874 ntBASIC3.09□□□□□ -1.92
MSH6P52701 MTCO1P40-201ENST00000574371 625 ntBASIC3.09□□□□□ -1.92
MSH6P52701 AL160237.3-201ENST00000604114 1013 ntBASIC3.09□□□□□ -1.92
MSH6P52701 AP000787.2-201ENST00000604432 568 ntBASIC3.09□□□□□ -1.92
MSH6P52701 AL009028.1-201ENST00000604895 802 ntBASIC3.09□□□□□ -1.92
MSH6P52701 AC128687.1-201ENST00000605304 619 ntBASIC3.09□□□□□ -1.92
MSH6P52701 AC016877.3-201ENST00000606778 504 ntBASIC3.09□□□□□ -1.92
MSH6P52701 AC245517.5-201ENST00000611529 162 ntBASIC3.09□□□□□ -1.92
MSH6P52701 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
MSH6P52701 MIR6766-201ENST00000622641 72 ntBASIC3.09□□□□□ -1.92
MSH6P52701 OR1S1-201ENST00000624470 978 ntBASIC3.09□□□□□ -1.92
MSH6P52701 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MSH6P52701 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.08□□□□□ -1.92
MSH6P52701 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
MSH6P52701 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
MSH6P52701 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MSH6P52701 Y_RNA.355-201ENST00000365462 98 ntBASIC3.08□□□□□ -1.92
MSH6P52701 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.08□□□□□ -1.92
MSH6P52701 RNU6-549P-201ENST00000384433 107 ntBASIC3.08□□□□□ -1.92
MSH6P52701 MTND2P16-201ENST00000419987 799 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.08□□□□□ -1.92
MSH6P52701 OFD1P18Y-201ENST00000420889 959 ntBASIC3.08□□□□□ -1.92
MSH6P52701 UBE2V1P6-201ENST00000430840 422 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.08□□□□□ -1.92
MSH6P52701 HMGB1P12-201ENST00000438594 598 ntBASIC3.08□□□□□ -1.92
MSH6P52701 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.08□□□□□ -1.92
MSH6P52701 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.08□□□□□ -1.92
MSH6P52701 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.08□□□□□ -1.92
MSH6P52701 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.08□□□□□ -1.92
MSH6P52701 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.08□□□□□ -1.92
MSH6P52701 HMGB3P15-201ENST00000507326 574 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.08□□□□□ -1.92
MSH6P52701 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.08□□□□□ -1.92
MSH6P52701 IGKV2D-36-201ENST00000518643 226 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AC090616.5-202ENST00000582111 297 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.08□□□□□ -1.92
MSH6P52701 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.08□□□□□ -1.92
MSH6P52701 RPL21P136-201ENST00000605378 396 ntBASIC3.08□□□□□ -1.92
MSH6P52701 HMGN2P28-201ENST00000606102 262 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AL158211.2-201ENST00000607282 395 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AC120053.1-201ENST00000607706 736 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AP001521.1-201ENST00000609150 300 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms