Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SNRPEP4-201ENST00000435815 279 ntBASIC4.14□□□□□ -1.75
NEK3P51956 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK3P51956 AC006011.1-201ENST00000442758 349 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AC244505.5-201ENST00000443639 207 ntBASIC4.14□□□□□ -1.75
NEK3P51956 MTCO2P7-201ENST00000446518 666 ntBASIC4.14□□□□□ -1.75
NEK3P51956 GAPDHP17-201ENST00000449858 1001 ntBASIC4.14□□□□□ -1.75
NEK3P51956 NANOGP10-201ENST00000453325 895 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK3P51956 AC069499.1-201ENST00000489433 509 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AL049874.1-201ENST00000489560 388 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK3P51956 NRON-201ENST00000517270 370 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK3P51956 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK3P51956 MIR3611-201ENST00000584484 83 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK3P51956 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK3P51956 AC025946.2-201ENST00000603398 234 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AC104662.1-201ENST00000604448 511 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.14□□□□□ -1.75
NEK3P51956 AC072046.2-201ENST00000618366 268 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AC110801.1-201ENST00000623590 212 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AL136313.1-201ENST00000624804 202 ntBASIC4.14□□□□□ -1.75
NEK3P51956 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NEK3P51956 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEK3P51956 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NEK3P51956 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEK3P51956 AF117829.1-206ENST00000621883 3802 ntBASIC4.14□□□□□ -1.75
NEK3P51956 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.14□□□□□ -1.75
NEK3P51956 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK3P51956 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.13□□□□□ -1.75
NEK3P51956 OTUD4P1-201ENST00000237841 3067 ntBASIC4.13□□□□□ -1.75
NEK3P51956 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.13□□□□□ -1.75
NEK3P51956 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK3P51956 HSPE1P11-201ENST00000339579 310 ntBASIC4.13□□□□□ -1.75
NEK3P51956 RNU6-511P-201ENST00000363496 107 ntBASIC4.13□□□□□ -1.75
NEK3P51956 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 MIR493-201ENST00000385254 89 ntBASIC4.13□□□□□ -1.75
NEK3P51956 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
NEK3P51956 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
NEK3P51956 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK3P51956 NDUFB4P6-201ENST00000436819 366 ntBASIC4.13□□□□□ -1.75
NEK3P51956 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 AC020550.1-201ENST00000447385 163 ntBASIC4.13□□□□□ -1.75
NEK3P51956 RPL30P5-201ENST00000494923 336 ntBASIC4.13□□□□□ -1.75
NEK3P51956 RPL29P14-201ENST00000495837 428 ntBASIC4.13□□□□□ -1.75
NEK3P51956 UBE2CP3-201ENST00000502715 450 ntBASIC4.13□□□□□ -1.75
NEK3P51956 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 AC093824.1-201ENST00000508796 343 ntBASIC4.13□□□□□ -1.75
NEK3P51956 SNORA18.6-201ENST00000516792 115 ntBASIC4.13□□□□□ -1.75
NEK3P51956 RNA5SP337-201ENST00000517007 109 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 ATP5F1P5-201ENST00000526403 760 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK3P51956 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK3P51956 MIR4286-201ENST00000580651 93 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 AC012417.1-201ENST00000582307 1039 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AL670379.6-201ENST00000603753 252 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AL670379.11-201ENST00000604059 253 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AC008162.1-201ENST00000604718 254 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AL670379.1-201ENST00000604752 252 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AL670379.5-201ENST00000605253 252 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AL670379.12-201ENST00000605291 253 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AL670379.8-201ENST00000605353 252 ntBASIC4.13□□□□□ -1.75
NEK3P51956 AL670379.7-201ENST00000605823 252 ntBASIC4.13□□□□□ -1.75
NEK3P51956 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 AC004696.1-201ENST00000614345 607 ntBASIC4.13□□□□□ -1.75
NEK3P51956 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEK3P51956 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NEK3P51956 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK3P51956 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.12□□□□□ -1.75
NEK3P51956 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
NEK3P51956 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEK3P51956 Y_RNA.194-201ENST00000363985 102 ntBASIC4.12□□□□□ -1.75
NEK3P51956 RNY1P12-201ENST00000364251 105 ntBASIC4.12□□□□□ -1.75
NEK3P51956 RNU1-64P-201ENST00000365443 163 ntBASIC4.12□□□□□ -1.75
NEK3P51956 RNU6-1119P-201ENST00000384349 108 ntBASIC4.12□□□□□ -1.75
NEK3P51956 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEK3P51956 AL663109.1-201ENST00000411498 844 ntBASIC4.12□□□□□ -1.75
NEK3P51956 C1DP2-201ENST00000418167 426 ntBASIC4.12□□□□□ -1.75
NEK3P51956 BX842559.1-201ENST00000419615 532 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AL451054.2-201ENST00000420896 202 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AC245054.1-201ENST00000420944 258 ntBASIC4.12□□□□□ -1.75
NEK3P51956 TMEM167AP1-201ENST00000423409 219 ntBASIC4.12□□□□□ -1.75
NEK3P51956 UBE2D3P2-201ENST00000424409 445 ntBASIC4.12□□□□□ -1.75
NEK3P51956 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.12□□□□□ -1.75
NEK3P51956 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms