Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.62□□□□□ -2.15
CENPFP49454 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
CENPFP49454 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
CENPFP49454 HSPD1P16-201ENST00000402302 394 ntBASIC1.62□□□□□ -2.15
CENPFP49454 AL445669.1-201ENST00000426743 755 ntBASIC1.62□□□□□ -2.15
CENPFP49454 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.62□□□□□ -2.15
CENPFP49454 AC009961.3-201ENST00000449832 765 ntBASIC1.62□□□□□ -2.15
CENPFP49454 MTCO3P44-201ENST00000510977 541 ntBASIC1.62□□□□□ -2.15
CENPFP49454 RNU6-405P-201ENST00000516637 110 ntBASIC1.62□□□□□ -2.15
CENPFP49454 RNU6-467P-201ENST00000517027 110 ntBASIC1.62□□□□□ -2.15
CENPFP49454 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CENPFP49454 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CENPFP49454 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.62□□□□□ -2.15
CENPFP49454 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.62□□□□□ -2.15
CENPFP49454 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CENPFP49454 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
CENPFP49454 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CENPFP49454 AC090774.1-201ENST00000435925 246 ntBASIC1.61□□□□□ -2.15
CENPFP49454 snoU13.3-201ENST00000459441 104 ntBASIC1.61□□□□□ -2.15
CENPFP49454 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.61□□□□□ -2.15
CENPFP49454 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.61□□□□□ -2.15
CENPFP49454 ARL2BPP4-201ENST00000506854 471 ntBASIC1.61□□□□□ -2.15
CENPFP49454 SNORA31.11-201ENST00000516528 139 ntBASIC1.61□□□□□ -2.15
CENPFP49454 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.61□□□□□ -2.15
CENPFP49454 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.61□□□□□ -2.15
CENPFP49454 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CENPFP49454 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CENPFP49454 RPL35AP22-201ENST00000436855 335 ntBASIC1.61□□□□□ -2.15
CENPFP49454 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.61□□□□□ -2.15
CENPFP49454 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.61□□□□□ -2.15
CENPFP49454 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CENPFP49454 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.61□□□□□ -2.15
CENPFP49454 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.61□□□□□ -2.15
CENPFP49454 SETP7-201ENST00000552169 453 ntBASIC1.61□□□□□ -2.15
CENPFP49454 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
CENPFP49454 AC021382.1-201ENST00000483523 359 ntBASIC1.61□□□□□ -2.15
CENPFP49454 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.61□□□□□ -2.15
CENPFP49454 AL049838.1-201ENST00000563647 981 ntBASIC1.61□□□□□ -2.15
CENPFP49454 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CENPFP49454 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CENPFP49454 MTND5P10-201ENST00000603719 1809 ntBASIC1.6□□□□□ -2.15
CENPFP49454 AC114973.1-201ENST00000429057 632 ntBASIC1.6□□□□□ -2.15
CENPFP49454 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CENPFP49454 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.6□□□□□ -2.15
CENPFP49454 MIR4448-201ENST00000584360 86 ntBASIC1.6□□□□□ -2.15
CENPFP49454 MIR3660-201ENST00000584845 100 ntBASIC1.6□□□□□ -2.15
CENPFP49454 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.6□□□□□ -2.15
CENPFP49454 AL158801.5-201ENST00000623123 465 ntBASIC1.6□□□□□ -2.15
CENPFP49454 AC022513.1-201ENST00000624512 117 ntBASIC1.6□□□□□ -2.15
CENPFP49454 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
CENPFP49454 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.6□□□□□ -2.15
CENPFP49454 AC092881.1-201ENST00000638218 2733 ntBASIC1.6□□□□□ -2.15
CENPFP49454 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.6□□□□□ -2.15
CENPFP49454 AC066616.2-201ENST00000559334 1481 ntBASIC1.6□□□□□ -2.15
CENPFP49454 AC240504.1-201ENST00000395709 845 ntBASIC1.6□□□□□ -2.15
CENPFP49454 SNRPEP2-201ENST00000397592 279 ntBASIC1.6□□□□□ -2.15
CENPFP49454 CKS1BP5-201ENST00000434172 273 ntBASIC1.6□□□□□ -2.15
CENPFP49454 RPL7P5-201ENST00000471472 736 ntBASIC1.6□□□□□ -2.15
CENPFP49454 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
CENPFP49454 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CENPFP49454 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.59□□□□□ -2.15
CENPFP49454 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.59□□□□□ -2.15
CENPFP49454 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.59□□□□□ -2.15
CENPFP49454 MTCO1P48-201ENST00000448024 1096 ntBASIC1.59□□□□□ -2.15
CENPFP49454 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.59□□□□□ -2.15
CENPFP49454 RPS29P20-201ENST00000489592 171 ntBASIC1.59□□□□□ -2.15
CENPFP49454 RPS26P24-201ENST00000497656 331 ntBASIC1.59□□□□□ -2.15
CENPFP49454 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.59□□□□□ -2.15
CENPFP49454 ZNF209P-201ENST00000593450 2304 ntBASIC1.59□□□□□ -2.15
CENPFP49454 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.59□□□□□ -2.16
CENPFP49454 AC008837.2-201ENST00000513076 418 ntBASIC1.59□□□□□ -2.16
CENPFP49454 SNORA31.15-201ENST00000516771 132 ntBASIC1.59□□□□□ -2.16
CENPFP49454 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.59□□□□□ -2.16
CENPFP49454 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.59□□□□□ -2.16
CENPFP49454 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.59□□□□□ -2.16
CENPFP49454 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.59□□□□□ -2.16
CENPFP49454 SGO1P2-201ENST00000429458 1589 ntBASIC1.59□□□□□ -2.16
CENPFP49454 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CENPFP49454 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
CENPFP49454 AL157827.1-201ENST00000447622 132 ntBASIC1.59□□□□□ -2.16
CENPFP49454 AC079776.3-201ENST00000450665 370 ntBASIC1.59□□□□□ -2.16
CENPFP49454 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.59□□□□□ -2.16
CENPFP49454 ATG10-AS1-201ENST00000504846 648 ntBASIC1.59□□□□□ -2.16
CENPFP49454 MTND5P4-201ENST00000514978 288 ntBASIC1.59□□□□□ -2.16
CENPFP49454 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.59□□□□□ -2.16
CENPFP49454 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.59□□□□□ -2.16
CENPFP49454 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.58□□□□□ -2.16
CENPFP49454 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CENPFP49454 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CENPFP49454 AC004223.1-201ENST00000479840 271 ntBASIC1.58□□□□□ -2.16
CENPFP49454 AC087190.1-201ENST00000484462 480 ntBASIC1.58□□□□□ -2.16
CENPFP49454 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.58□□□□□ -2.16
CENPFP49454 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.58□□□□□ -2.16
CENPFP49454 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
CENPFP49454 IFNWP4-201ENST00000453148 294 ntBASIC1.58□□□□□ -2.16
CENPFP49454 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.58□□□□□ -2.16
CENPFP49454 RNA5SP395-201ENST00000516567 118 ntBASIC1.58□□□□□ -2.16
CENPFP49454 AC099654.11-201ENST00000638857 294 ntBASIC1.58□□□□□ -2.16
CENPFP49454 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CENPFP49454 Y_RNA.303-201ENST00000364998 94 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms