Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL35P42766 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPL35P42766 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.72□□□□□ -2.13
RPL35P42766 MTND5P31-201ENST00000419366 1374 ntBASIC1.72□□□□□ -2.13
RPL35P42766 AC130650.2-201ENST00000618736 2403 ntBASIC1.71□□□□□ -2.14
RPL35P42766 CCT4P2-201ENST00000233836 1548 ntBASIC1.71□□□□□ -2.14
RPL35P42766 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.71□□□□□ -2.14
RPL35P42766 AL390862.1-201ENST00000635467 1469 ntBASIC1.71□□□□□ -2.14
RPL35P42766 TPTE2P4-201ENST00000258589 1605 ntBASIC1.71□□□□□ -2.14
RPL35P42766 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPL35P42766 RNU4-23P-201ENST00000362839 140 ntBASIC1.71□□□□□ -2.14
RPL35P42766 RNU6-270P-201ENST00000364131 105 ntBASIC1.71□□□□□ -2.14
RPL35P42766 RNU6-921P-201ENST00000384361 107 ntBASIC1.71□□□□□ -2.14
RPL35P42766 MIR518C-201ENST00000384822 101 ntBASIC1.71□□□□□ -2.14
RPL35P42766 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
RPL35P42766 RNA5SP80-201ENST00000410475 111 ntBASIC1.71□□□□□ -2.14
RPL35P42766 RN7SKP140-201ENST00000411196 284 ntBASIC1.71□□□□□ -2.14
RPL35P42766 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.71□□□□□ -2.14
RPL35P42766 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL35P42766 AL358075.3-201ENST00000426289 226 ntBASIC1.71□□□□□ -2.14
RPL35P42766 RPP40P1-201ENST00000426762 456 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AL714022.1-201ENST00000439897 151 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL35P42766 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL35P42766 ANKRD26P4-201ENST00000455755 950 ntBASIC1.71□□□□□ -2.14
RPL35P42766 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL35P42766 SNORD109B-201ENST00000458961 67 ntBASIC1.71□□□□□ -2.14
RPL35P42766 SNORD109A-201ENST00000459128 67 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL35P42766 AC116337.2-201ENST00000477662 156 ntBASIC1.71□□□□□ -2.14
RPL35P42766 RPL31P60-201ENST00000478450 367 ntBASIC1.71□□□□□ -2.14
RPL35P42766 VPS26AP1-201ENST00000483197 979 ntBASIC1.71□□□□□ -2.14
RPL35P42766 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPL35P42766 MTCO1P31-201ENST00000506355 492 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AC022447.3-201ENST00000506865 495 ntBASIC1.71□□□□□ -2.14
RPL35P42766 RNU6-1095P-201ENST00000516148 108 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL35P42766 HMGB1P14-201ENST00000557424 591 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AL049838.1-201ENST00000563647 981 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AC034105.4-201ENST00000568304 277 ntBASIC1.71□□□□□ -2.14
RPL35P42766 MIR3158-1-201ENST00000583596 81 ntBASIC1.71□□□□□ -2.14
RPL35P42766 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPL35P42766 AC010928.2-201ENST00000588017 287 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AL020997.2-201ENST00000602607 184 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AL022099.1-201ENST00000604551 712 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AP000254.1-201ENST00000609934 520 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AC004852.3-201ENST00000614131 326 ntBASIC1.71□□□□□ -2.14
RPL35P42766 AC034229.5-201ENST00000624258 185 ntBASIC1.71□□□□□ -2.14
RPL35P42766 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPL35P42766 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
RPL35P42766 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPL35P42766 SNORA44-201ENST00000384584 132 ntBASIC1.7□□□□□ -2.14
RPL35P42766 CIR1P3-201ENST00000405137 479 ntBASIC1.7□□□□□ -2.14
RPL35P42766 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
RPL35P42766 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL35P42766 RPL27AP8-201ENST00000424277 446 ntBASIC1.7□□□□□ -2.14
RPL35P42766 RPL7P44-201ENST00000424827 742 ntBASIC1.7□□□□□ -2.14
RPL35P42766 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL35P42766 ARL5AP4-201ENST00000430731 512 ntBASIC1.7□□□□□ -2.14
RPL35P42766 FABP5P3-201ENST00000437960 408 ntBASIC1.7□□□□□ -2.14
RPL35P42766 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.7□□□□□ -2.14
RPL35P42766 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL35P42766 NANOGNBP1-201ENST00000448444 480 ntBASIC1.7□□□□□ -2.14
RPL35P42766 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.7□□□□□ -2.14
RPL35P42766 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.7□□□□□ -2.14
RPL35P42766 PPP1R2P5-201ENST00000457256 603 ntBASIC1.7□□□□□ -2.14
RPL35P42766 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL35P42766 RNU6-928P-201ENST00000516876 104 ntBASIC1.7□□□□□ -2.14
RPL35P42766 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL35P42766 AC021269.2-201ENST00000532318 330 ntBASIC1.7□□□□□ -2.14
RPL35P42766 OR8K4P-201ENST00000534608 872 ntBASIC1.7□□□□□ -2.14
RPL35P42766 EEF1B2P4-201ENST00000551398 348 ntBASIC1.7□□□□□ -2.14
RPL35P42766 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.7□□□□□ -2.14
RPL35P42766 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.7□□□□□ -2.14
RPL35P42766 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.7□□□□□ -2.14
RPL35P42766 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.7□□□□□ -2.14
RPL35P42766 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
RPL35P42766 AC022069.1-201ENST00000582910 658 ntBASIC1.7□□□□□ -2.14
RPL35P42766 AC103810.6-201ENST00000606708 136 ntBASIC1.7□□□□□ -2.14
RPL35P42766 AC021851.1-201ENST00000608537 1082 ntBASIC1.7□□□□□ -2.14
RPL35P42766 OR10AB1P-201ENST00000609613 938 ntBASIC1.7□□□□□ -2.14
RPL35P42766 OR1S1-201ENST00000624470 978 ntBASIC1.7□□□□□ -2.14
RPL35P42766 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.7□□□□□ -2.14
RPL35P42766 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RPL35P42766 MTND5P1-201ENST00000445440 1375 ntBASIC1.7□□□□□ -2.14
RPL35P42766 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPL35P42766 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPL35P42766 AC008568.2-201ENST00000623862 2313 ntBASIC1.69□□□□□ -2.14
RPL35P42766 AC008432.1-201ENST00000615912 1320 ntBASIC1.69□□□□□ -2.14
RPL35P42766 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.69□□□□□ -2.14
RPL35P42766 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
RPL35P42766 ENSAP3-201ENST00000312710 333 ntBASIC1.69□□□□□ -2.14
RPL35P42766 MIR134-201ENST00000385258 73 ntBASIC1.69□□□□□ -2.14
RPL35P42766 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RPL35P42766 AL122016.1-201ENST00000403365 367 ntBASIC1.69□□□□□ -2.14
RPL35P42766 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.69□□□□□ -2.14
RPL35P42766 HMGB1P11-201ENST00000413899 637 ntBASIC1.69□□□□□ -2.14
RPL35P42766 SEPT2P1-201ENST00000419651 180 ntBASIC1.69□□□□□ -2.14
RPL35P42766 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms