Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MRPS31P2-201ENST00000451581 518 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.41□□□□□ -1.86
HNF4AP41235 RNU7-136P-201ENST00000458819 69 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 RPL30P6-201ENST00000475925 342 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 RPL30P5-201ENST00000494923 336 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.41□□□□□ -1.86
HNF4AP41235 AC005178.1-201ENST00000508392 440 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 PHBP14-201ENST00000512887 367 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AC093677.1-201ENST00000514414 678 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 RNU6-528P-201ENST00000516926 100 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.41□□□□□ -1.86
HNF4AP41235 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.41□□□□□ -1.86
HNF4AP41235 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.41□□□□□ -1.86
HNF4AP41235 MTCYBP33-201ENST00000575007 1130 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 MIR3609-201ENST00000582661 80 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.41□□□□□ -1.86
HNF4AP41235 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.41□□□□□ -1.86
HNF4AP41235 AC006270.3-201ENST00000605967 1036 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.41□□□□□ -1.86
HNF4AP41235 AL450472.3-201ENST00000615578 367 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HNF4AP41235 AC012442.3-202ENST00000636742 206 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HNF4AP41235 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.41□□□□□ -1.86
HNF4AP41235 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HNF4AP41235 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.4□□□□□ -1.86
HNF4AP41235 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HNF4AP41235 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HNF4AP41235 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HNF4AP41235 RNU6-799P-201ENST00000363567 107 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 SNORA73.2-201ENST00000364946 201 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.4□□□□□ -1.87
HNF4AP41235 PTMAP2-201ENST00000397627 327 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AL031577.2-201ENST00000404133 280 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.4□□□□□ -1.87
HNF4AP41235 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
HNF4AP41235 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.4□□□□□ -1.87
HNF4AP41235 AL590383.1-201ENST00000428602 75 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AL356867.1-201ENST00000429623 299 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 MTND1P20-201ENST00000430341 950 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.4□□□□□ -1.87
HNF4AP41235 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.4□□□□□ -1.87
HNF4AP41235 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.4□□□□□ -1.87
HNF4AP41235 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.4□□□□□ -1.87
HNF4AP41235 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.4□□□□□ -1.87
HNF4AP41235 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.4□□□□□ -1.87
HNF4AP41235 TPTE2P5-203ENST00000458118 728 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 FCF1P3-201ENST00000496394 590 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AC093281.2-201ENST00000510153 597 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.4□□□□□ -1.87
HNF4AP41235 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.4□□□□□ -1.87
HNF4AP41235 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.4□□□□□ -1.87
HNF4AP41235 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HNF4AP41235 NDUFB9P3-201ENST00000521269 501 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.4□□□□□ -1.87
HNF4AP41235 AP000867.2-201ENST00000532468 320 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.4□□□□□ -1.87
HNF4AP41235 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HNF4AP41235 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.4□□□□□ -1.87
HNF4AP41235 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.4□□□□□ -1.87
HNF4AP41235 TGIF1P1-201ENST00000558095 802 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HNF4AP41235 AL512347.1-201ENST00000566420 503 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 NBR2-204ENST00000587322 63 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 GLUD1P4-201ENST00000590914 418 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AC006116.10-201ENST00000591836 581 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AC146944.4-201ENST00000602697 718 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 WISP1-OT1-201ENST00000602893 642 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 BBIP1P1-201ENST00000602999 279 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AP000811.1-201ENST00000603803 651 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 AC245297.2-201ENST00000610119 565 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 AL445264.1-201ENST00000621719 171 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HNF4AP41235 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HNF4AP41235 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.4□□□□□ -1.87
HNF4AP41235 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 OR5BR1P-201ENST00000524992 1330 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.87
HNF4AP41235 AC007496.3-201ENST00000624987 3443 ntBASIC3.4□□□□□ -1.87
HNF4AP41235 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.39□□□□□ -1.87
HNF4AP41235 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.39□□□□□ -1.87
HNF4AP41235 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HNF4AP41235 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.39□□□□□ -1.87
HNF4AP41235 AL022578.1-201ENST00000439330 1433 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HNF4AP41235 FRG1CP-201ENST00000358464 769 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 Y_RNA.234-201ENST00000364409 97 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms