Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL391597.1-201ENST00000618707 694 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.09□□□□□ -2.07
COL4A5P29400 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.09□□□□□ -2.07
COL4A5P29400 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.09□□□□□ -2.07
COL4A5P29400 U6.98-201ENST00000637157 84 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL4A5P29400 AL049737.1-201ENST00000413920 1403 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL4A5P29400 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL4A5P29400 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.09□□□□□ -2.08
COL4A5P29400 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.09□□□□□ -2.08
COL4A5P29400 RNU6-392P-201ENST00000364926 101 ntBASIC2.09□□□□□ -2.08
COL4A5P29400 RNU4-74P-201ENST00000411280 161 ntBASIC2.09□□□□□ -2.08
COL4A5P29400 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.09□□□□□ -2.08
COL4A5P29400 FO393419.3-201ENST00000428741 282 ntBASIC2.09□□□□□ -2.08
COL4A5P29400 HMGN2P21-201ENST00000447764 270 ntBASIC2.09□□□□□ -2.08
COL4A5P29400 AC080013.2-201ENST00000460866 323 ntBASIC2.09□□□□□ -2.08
COL4A5P29400 HMGB1P47-201ENST00000511281 589 ntBASIC2.09□□□□□ -2.08
COL4A5P29400 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.09□□□□□ -2.08
COL4A5P29400 AC131902.3-201ENST00000611767 581 ntBASIC2.09□□□□□ -2.08
COL4A5P29400 MIR6864-201ENST00000617935 70 ntBASIC2.09□□□□□ -2.08
COL4A5P29400 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.08□□□□□ -2.08
COL4A5P29400 RNU6-452P-201ENST00000384406 107 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 AC244098.2-201ENST00000422068 99 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 PSMA2P3-201ENST00000429685 675 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.08□□□□□ -2.08
COL4A5P29400 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A5P29400 RPL21P104-201ENST00000464143 478 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL4A5P29400 AC110792.2-201ENST00000510278 224 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 AC133963.2-201ENST00000513686 578 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 IGLV3-17-201ENST00000519099 244 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 MAGOH2P-202ENST00000584384 429 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 AC091488.1-201ENST00000604239 660 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 AC024560.3-201ENST00000608482 349 ntBASIC2.08□□□□□ -2.08
COL4A5P29400 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL4A5P29400 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL4A5P29400 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A5P29400 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A5P29400 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
COL4A5P29400 AC000367.1-201ENST00000452711 1766 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 RNU4-23P-201ENST00000362839 140 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 RNU6-670P-201ENST00000364312 104 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A5P29400 RNU6-31P-201ENST00000384388 108 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.07□□□□□ -2.08
COL4A5P29400 SNRPGP3-201ENST00000469405 227 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A5P29400 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A5P29400 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
COL4A5P29400 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.07□□□□□ -2.08
COL4A5P29400 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.07□□□□□ -2.08
COL4A5P29400 RNU6-889P-201ENST00000517189 103 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 HMGN1P28-201ENST00000521340 364 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 AC013444.2-201ENST00000603317 787 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 AC005296.1-201ENST00000616145 209 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 XIST_intron.1-201ENST00000619444 68 ntBASIC2.07□□□□□ -2.08
COL4A5P29400 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COL4A5P29400 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A5P29400 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL4A5P29400 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL4A5P29400 RNA5SP27-201ENST00000363839 119 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.06□□□□□ -2.08
COL4A5P29400 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A5P29400 RPS7P2-201ENST00000435134 607 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 UBE2V1P5-201ENST00000440070 405 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 XKRY2-201ENST00000442362 1093 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AL513343.1-201ENST00000451818 792 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A5P29400 AC027673.1-201ENST00000456245 405 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A5P29400 RPL37P6-202ENST00000464216 403 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC078918.1-201ENST00000498515 228 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A5P29400 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.06□□□□□ -2.08
COL4A5P29400 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.06□□□□□ -2.08
COL4A5P29400 PSMA3P-201ENST00000555485 635 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC010735.1-201ENST00000567305 1026 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 MYL12BP1-201ENST00000569826 507 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC103987.3-201ENST00000582071 292 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 SNRPGP15-201ENST00000600149 222 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AL009028.1-201ENST00000604895 802 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC126118.1-201ENST00000607744 628 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 U73479.1-201ENST00000618062 168 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC006065.5-201ENST00000623427 349 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A5P29400 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A5P29400 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A5P29400 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL4A5P29400 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 RNU4-13P-201ENST00000364019 141 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 SNORA51.2-201ENST00000364595 132 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 Z98749.2-208ENST00000381646 500 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL4A5P29400 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A5P29400 AC004022.2-201ENST00000413824 193 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 RAD1P2-201ENST00000446414 663 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC092685.1-201ENST00000447960 1243 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms