Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNA5SP216-201ENST00000516111 123 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.14□□□□□ -1.91
PTPN4P29074 FAM60DP-201ENST00000524174 632 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN4P29074 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPN4P29074 AC005476.1-201ENST00000554427 397 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 MTND4P33-201ENST00000556706 766 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AC106782.4-201ENST00000568264 210 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.14□□□□□ -1.91
PTPN4P29074 VN1R78P-201ENST00000597393 564 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AC135507.2-201ENST00000612443 309 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 MIR4275-201ENST00000636486 87 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AC233263.6-201ENST00000631132 1963 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN4P29074 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN4P29074 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN4P29074 TAB3P1-202ENST00000452645 1634 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 FRG1BP-201ENST00000278882 761 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 MIR493-201ENST00000385254 89 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 MIR1284-201ENST00000408337 120 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.13□□□□□ -1.91
PTPN4P29074 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN4P29074 AC007742.1-201ENST00000425789 329 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN4P29074 ELOCP26-201ENST00000436067 329 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN4P29074 AL671855.1-201ENST00000446875 1203 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 RPL21P134-201ENST00000453468 483 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 AP004217.1-201ENST00000480579 346 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN4P29074 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN4P29074 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.13□□□□□ -1.91
PTPN4P29074 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN4P29074 MTCO3P24-201ENST00000572729 782 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 DUXAP3-201ENST00000603616 594 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 AC097478.2-201ENST00000610572 514 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 AC069234.5-201ENST00000611056 416 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN4P29074 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN4P29074 AC011460.1-201ENST00000636268 1834 ntBASIC3.13□□□□□ -1.91
PTPN4P29074 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PTPN4P29074 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN4P29074 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN4P29074 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN4P29074 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN4P29074 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN4P29074 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN4P29074 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PTPN4P29074 MIR1290-201ENST00000408735 78 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN4P29074 TPMTP2-201ENST00000414372 726 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN4P29074 COX7BP2-201ENST00000437976 242 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 SNRPEP7-201ENST00000438350 220 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC005297.2-201ENST00000450430 606 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 snoU13.8-201ENST00000458890 104 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 RPS3AP43-201ENST00000479743 781 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 AC068724.1-201ENST00000487100 792 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 AC023424.2-201ENST00000493479 777 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 MTCYBP17-201ENST00000503579 789 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN4P29074 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN4P29074 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC116353.3-201ENST00000511215 249 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 RN7SKP265-201ENST00000516448 223 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC239860.2-201ENST00000525886 270 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 MTCO2P15-201ENST00000532655 656 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN4P29074 HIGD1AP1-201ENST00000550979 275 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN4P29074 AC004853.1-201ENST00000604902 698 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 AC007349.4-201ENST00000608114 532 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 AC009464.1-201ENST00000615731 469 ntBASIC3.12□□□□□ -1.91
PTPN4P29074 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN4P29074 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPN4P29074 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPN4P29074 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AP000568.1-201ENST00000282964 442 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPN4P29074 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PTPN4P29074 RNA5SP139-201ENST00000364340 117 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 RNU6-882P-201ENST00000391025 103 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC063979.1-201ENST00000415539 377 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 ATP5F1P1-201ENST00000433775 569 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
PTPN4P29074 ATP5C1P1-201ENST00000441945 895 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 Z73417.1-201ENST00000447373 778 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms