Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 Y_RNA.100-201ENST00000363141 102 ntBASIC5.65□□□□□ -1.5
RXRBP28702 Y_RNA.112-201ENST00000363250 102 ntBASIC5.65□□□□□ -1.5
RXRBP28702 Y_RNA.148-201ENST00000363557 117 ntBASIC5.65□□□□□ -1.5
RXRBP28702 Y_RNA.187-201ENST00000363918 113 ntBASIC5.65□□□□□ -1.5
RXRBP28702 RNU6-522P-201ENST00000364497 107 ntBASIC5.65□□□□□ -1.5
RXRBP28702 RNU6-606P-201ENST00000384721 111 ntBASIC5.65□□□□□ -1.5
RXRBP28702 AL603908.1-201ENST00000406098 201 ntBASIC5.65□□□□□ -1.5
RXRBP28702 RNU2-47P-201ENST00000410649 186 ntBASIC5.65□□□□□ -1.5
RXRBP28702 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RXRBP28702 AC022022.1-201ENST00000430304 178 ntBASIC5.65□□□□□ -1.5
RXRBP28702 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.65□□□□□ -1.5
RXRBP28702 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.65□□□□□ -1.5
RXRBP28702 AL049734.2-201ENST00000441066 616 ntBASIC5.65□□□□□ -1.5
RXRBP28702 HMGB3P22-202ENST00000451823 572 ntBASIC5.65□□□□□ -1.5
RXRBP28702 RPL37P3-201ENST00000456825 293 ntBASIC5.65□□□□□ -1.5
RXRBP28702 Y_RNA.635-201ENST00000459041 101 ntBASIC5.65□□□□□ -1.5
RXRBP28702 HMGB1P30-201ENST00000492455 606 ntBASIC5.65□□□□□ -1.5
RXRBP28702 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.65□□□□□ -1.5
RXRBP28702 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.65□□□□□ -1.5
RXRBP28702 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.65□□□□□ -1.5
RXRBP28702 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.65□□□□□ -1.5
RXRBP28702 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.65□□□□□ -1.5
RXRBP28702 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.65□□□□□ -1.5
RXRBP28702 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.65□□□□□ -1.5
RXRBP28702 MAGOH2P-202ENST00000584384 429 ntBASIC5.65□□□□□ -1.5
RXRBP28702 SNORD39.3-201ENST00000584451 71 ntBASIC5.65□□□□□ -1.5
RXRBP28702 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.65□□□□□ -1.5
RXRBP28702 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.65□□□□□ -1.5
RXRBP28702 AC055839.1-201ENST00000634467 498 ntBASIC5.65□□□□□ -1.5
RXRBP28702 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RXRBP28702 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RXRBP28702 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RXRBP28702 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
RXRBP28702 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RXRBP28702 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.64□□□□□ -1.51
RXRBP28702 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.64□□□□□ -1.51
RXRBP28702 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.64□□□□□ -1.51
RXRBP28702 MAPK10-372ENST00000641954 3413 ntBASIC5.64□□□□□ -1.51
RXRBP28702 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RXRBP28702 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RXRBP28702 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RXRBP28702 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.64□□□□□ -1.51
RXRBP28702 RNA5SP432-201ENST00000362480 116 ntBASIC5.64□□□□□ -1.51
RXRBP28702 RNU6-744P-201ENST00000365557 107 ntBASIC5.64□□□□□ -1.51
RXRBP28702 RNU6-1316P-201ENST00000384242 108 ntBASIC5.64□□□□□ -1.51
RXRBP28702 CISD1P1-201ENST00000393907 327 ntBASIC5.64□□□□□ -1.51
RXRBP28702 RNU6-193P-201ENST00000410977 107 ntBASIC5.64□□□□□ -1.51
RXRBP28702 RN7SKP247-201ENST00000411094 308 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AL691449.1-201ENST00000426570 421 ntBASIC5.64□□□□□ -1.51
RXRBP28702 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.64□□□□□ -1.51
RXRBP28702 AL159987.2-201ENST00000432754 307 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.64□□□□□ -1.51
RXRBP28702 RNU7-66P-201ENST00000459469 62 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC026410.2-201ENST00000460281 156 ntBASIC5.64□□□□□ -1.51
RXRBP28702 RPS20P21-201ENST00000466859 343 ntBASIC5.64□□□□□ -1.51
RXRBP28702 GMFBP1-201ENST00000467831 427 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC010655.3-201ENST00000478818 450 ntBASIC5.64□□□□□ -1.51
RXRBP28702 RNU6-202P-201ENST00000515998 96 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.64□□□□□ -1.51
RXRBP28702 RPL7P20-201ENST00000520308 745 ntBASIC5.64□□□□□ -1.51
RXRBP28702 OR5B10P-201ENST00000532869 642 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.64□□□□□ -1.51
RXRBP28702 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.64□□□□□ -1.51
RXRBP28702 MIR4680-201ENST00000580906 66 ntBASIC5.64□□□□□ -1.51
RXRBP28702 MIR3936-201ENST00000584304 110 ntBASIC5.64□□□□□ -1.51
RXRBP28702 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.64□□□□□ -1.51
RXRBP28702 AC008687.2-201ENST00000597865 520 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.64□□□□□ -1.51
RXRBP28702 AC121334.2-201ENST00000605387 271 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC074140.1-201ENST00000621617 208 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC140113.4-201ENST00000622087 222 ntBASIC5.64□□□□□ -1.51
RXRBP28702 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.64□□□□□ -1.51
RXRBP28702 AC114546.3-201ENST00000623582 1734 ntBASIC5.64□□□□□ -1.51
RXRBP28702 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.64□□□□□ -1.51
RXRBP28702 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RXRBP28702 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RXRBP28702 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.64□□□□□ -1.51
RXRBP28702 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RXRBP28702 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RXRBP28702 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
RXRBP28702 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RXRBP28702 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
RXRBP28702 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 AC105074.1-201ENST00000623380 3095 ntBASIC5.63□□□□□ -1.51
RXRBP28702 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 U3.12-201ENST00000364498 214 ntBASIC5.63□□□□□ -1.51
RXRBP28702 MIR128-1-201ENST00000384921 82 ntBASIC5.63□□□□□ -1.51
RXRBP28702 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
RXRBP28702 AL121834.1-202ENST00000404494 277 ntBASIC5.63□□□□□ -1.51
RXRBP28702 MIR1289-1-201ENST00000408836 144 ntBASIC5.63□□□□□ -1.51
RXRBP28702 RNU6-985P-201ENST00000410182 104 ntBASIC5.63□□□□□ -1.51
RXRBP28702 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.63□□□□□ -1.51
RXRBP28702 DDX3P2-201ENST00000446138 111 ntBASIC5.63□□□□□ -1.51
RXRBP28702 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 MTATP8P1-201ENST00000467115 207 ntBASIC5.63□□□□□ -1.51
RXRBP28702 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.63□□□□□ -1.51
RXRBP28702 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms