Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 AC098799.2-201ENST00000509466 868 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 MTCO3P44-201ENST00000510977 541 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 AC008549.1-201ENST00000512900 643 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXD10P28358 SNORA31.8-201ENST00000516327 108 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXD10P28358 AP001542.2-201ENST00000593141 364 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 AL158827.2-201ENST00000602494 330 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 AL445435.1-201ENST00000604232 665 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 AC097504.2-201ENST00000608088 454 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 AC025034.2-201ENST00000623264 286 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 AL691447.3-201ENST00000635020 330 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 AC013437.2-201ENST00000639587 677 ntBASIC3.18□□□□□ -1.9
HOXD10P28358 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD10P28358 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD10P28358 MTND5P24-201ENST00000438892 1767 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 ZNF658B-202ENST00000615961 3375 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC011460.1-201ENST00000636268 1834 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HOXD10P28358 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HOXD10P28358 RNU6-707P-201ENST00000364647 95 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HOXD10P28358 MTCO1P56-201ENST00000401674 224 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 RNU2-25P-201ENST00000411041 191 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD10P28358 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 TMEM167AP1-201ENST00000423409 219 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC006548.1-201ENST00000427470 102 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD10P28358 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD10P28358 LSM1P1-201ENST00000438629 273 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 WASF1P1-201ENST00000447560 1131 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD10P28358 NDUFA5P7-201ENST00000452914 242 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC104164.3-201ENST00000467363 1258 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD10P28358 DYNLL1P6-201ENST00000503440 264 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC084024.2-201ENST00000503480 791 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC096571.1-202ENST00000506634 735 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 SEM1P1-201ENST00000506694 209 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD10P28358 RNU6-415P-201ENST00000516252 97 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD10P28358 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.17□□□□□ -1.9
HOXD10P28358 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXD10P28358 AC021451.1-201ENST00000523498 1129 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 OR4A45P-201ENST00000529954 901 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD10P28358 AC128657.1-201ENST00000549459 145 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD10P28358 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD10P28358 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXD10P28358 AP003973.1-201ENST00000604639 691 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 RNU6-1192P-201ENST00000612197 107 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AL592148.2-201ENST00000612210 372 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 RNU6-489P-201ENST00000618289 107 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 AL158163.2-201ENST00000619110 700 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 CR381572.1-201ENST00000625098 102 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXD10P28358 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HOXD10P28358 AC026241.1-201ENST00000517873 2142 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXD10P28358 ASNSP3-201ENST00000451989 1306 ntBASIC3.17□□□□□ -1.9
HOXD10P28358 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HOXD10P28358 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HOXD10P28358 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD10P28358 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXD10P28358 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD10P28358 RNU6-1249P-201ENST00000363237 111 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 RNVU1-3-201ENST00000364313 161 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AL121978.1-201ENST00000402778 359 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AL079342.2-201ENST00000403367 482 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AL133264.1-201ENST00000407157 562 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD10P28358 HMGN2P30-201ENST00000423237 256 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 RAC1P8-201ENST00000427086 527 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD10P28358 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD10P28358 AC112653.1-201ENST00000443851 386 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 HMGB3P6-201ENST00000444896 598 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXD10P28358 EXOSC3P1-201ENST00000448649 500 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AL009048.1-201ENST00000450437 298 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD10P28358 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXD10P28358 RPS20P22-201ENST00000473700 357 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC118282.1-201ENST00000506408 765 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 MLLT10P2-201ENST00000506434 249 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC113420.1-201ENST00000507903 571 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD10P28358 DEFB130C-202ENST00000530001 230 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD10P28358 GLUD1P4-201ENST00000590914 418 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.16□□□□□ -1.9
HOXD10P28358 AC024060.1-201ENST00000607052 494 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms