Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 CR769776.1-201ENST00000441254 787 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC011753.1-201ENST00000451001 220 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 CALM1P2-201ENST00000452941 448 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 SNORD11.1-201ENST00000459482 85 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 snoU13.18-201ENST00000459483 104 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC092754.2-201ENST00000463506 460 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC006483.1-201ENST00000487308 313 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.19□□□□□ -2.06
COL5A1P20908 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC117522.2-201ENST00000510049 657 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.19□□□□□ -2.06
COL5A1P20908 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.19□□□□□ -2.06
COL5A1P20908 GNAI2P1-201ENST00000541815 315 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 NDUFA5P6-201ENST00000542110 379 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AP003717.3-201ENST00000544832 1180 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC068714.1-201ENST00000559623 800 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL5A1P20908 NF1P5-201ENST00000588287 448 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC083899.3-201ENST00000603413 594 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC002487.1-201ENST00000604565 994 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC018618.2-201ENST00000604770 446 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AP004247.3-201ENST00000608682 624 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC048344.4-201ENST00000619744 527 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL5A1P20908 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.19□□□□□ -2.06
COL5A1P20908 DCAF13P1-201ENST00000495256 1330 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
COL5A1P20908 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL5A1P20908 MTCO2P31-201ENST00000402702 684 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.18□□□□□ -2.06
COL5A1P20908 RNA5SP344-201ENST00000411081 104 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 MTATP6P20-201ENST00000414147 562 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 RPS3AP37-201ENST00000419176 745 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 USP9YP11-201ENST00000427537 717 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.18□□□□□ -2.06
COL5A1P20908 FABP5P3-201ENST00000437960 408 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.18□□□□□ -2.06
COL5A1P20908 MTATP6P26-201ENST00000445926 662 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 MTND2P8-201ENST00000450555 1025 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 SNORD108-201ENST00000459332 71 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.18□□□□□ -2.06
COL5A1P20908 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.18□□□□□ -2.06
COL5A1P20908 MTCYBP35-201ENST00000503630 1137 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.18□□□□□ -2.06
COL5A1P20908 AL161713.1-201ENST00000555538 145 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.18□□□□□ -2.06
COL5A1P20908 MAGOH2P-202ENST00000584384 429 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 VN1R84P-201ENST00000593697 235 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 AC113368.1-201ENST00000603736 382 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 SUMO2P14-201ENST00000604488 293 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 snoU13.31-201ENST00000607291 104 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 AL138478.1-201ENST00000612252 832 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 AC140725.3-201ENST00000616193 880 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 AC010297.1-201ENST00000623948 149 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 AC006963.1-201ENST00000624003 1052 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL5A1P20908 MIR4278-201ENST00000636094 69 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL5A1P20908 AF127577.6-201ENST00000623352 2191 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL5A1P20908 MTCO1P18-201ENST00000455518 1419 ntBASIC2.18□□□□□ -2.06
COL5A1P20908 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
COL5A1P20908 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.17□□□□□ -2.06
COL5A1P20908 Y_RNA.472-201ENST00000384322 102 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 RNU6-77P-201ENST00000410554 91 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC092745.2-202ENST00000411880 369 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.17□□□□□ -2.06
COL5A1P20908 AL449283.1-202ENST00000418249 604 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.17□□□□□ -2.06
COL5A1P20908 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.17□□□□□ -2.06
COL5A1P20908 NPM1P49-201ENST00000448027 714 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.17□□□□□ -2.06
COL5A1P20908 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.17□□□□□ -2.06
COL5A1P20908 AC111193.1-201ENST00000504097 155 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 HSPE1P18-201ENST00000517602 280 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.17□□□□□ -2.06
COL5A1P20908 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.17□□□□□ -2.06
COL5A1P20908 HMGB1P1-201ENST00000522557 636 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.17□□□□□ -2.06
COL5A1P20908 AC023538.1-201ENST00000534576 736 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC139103.1-201ENST00000534696 1030 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.17□□□□□ -2.06
COL5A1P20908 CYB5AP5-201ENST00000549779 389 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC087897.1-201ENST00000550134 156 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.17□□□□□ -2.06
COL5A1P20908 MIR3670-2-201ENST00000582974 65 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 MIR3670-1-201ENST00000584160 65 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 MIR3670-3-201ENST00000584855 65 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC012254.4-201ENST00000588843 273 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms