Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RPL21P17-201ENST00000397467 475 ntBASIC3.49□□□□□ -1.85
CDH1P12830 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
CDH1P12830 RNU6ATAC-201ENST00000408749 126 ntBASIC3.49□□□□□ -1.85
CDH1P12830 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH1P12830 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH1P12830 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH1P12830 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH1P12830 AL158071.1-201ENST00000430315 461 ntBASIC3.49□□□□□ -1.85
CDH1P12830 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH1P12830 AL359073.1-201ENST00000448036 403 ntBASIC3.49□□□□□ -1.85
CDH1P12830 RPL7P52-201ENST00000449200 742 ntBASIC3.49□□□□□ -1.85
CDH1P12830 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH1P12830 GAPDHP17-201ENST00000449858 1001 ntBASIC3.49□□□□□ -1.85
CDH1P12830 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH1P12830 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH1P12830 RN7SL542P-201ENST00000467147 294 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH1P12830 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH1P12830 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH1P12830 AC107401.1-201ENST00000503426 685 ntBASIC3.49□□□□□ -1.85
CDH1P12830 TMEM248P1-201ENST00000510579 951 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH1P12830 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH1P12830 SNORA18.6-201ENST00000516792 115 ntBASIC3.49□□□□□ -1.85
CDH1P12830 RNU6-201P-201ENST00000517100 61 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH1P12830 TGIF1P1-201ENST00000558095 802 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AC137800.2-201ENST00000574375 120 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AC090615.1-201ENST00000577519 154 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AC006130.2-201ENST00000586202 326 ntBASIC3.49□□□□□ -1.85
CDH1P12830 HMGN1P30-201ENST00000589286 268 ntBASIC3.49□□□□□ -1.85
CDH1P12830 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH1P12830 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH1P12830 AC112230.1-201ENST00000604342 547 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AL109618.2-201ENST00000605527 211 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AC092794.1-201ENST00000612734 582 ntBASIC3.49□□□□□ -1.85
CDH1P12830 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH1P12830 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.49□□□□□ -1.85
CDH1P12830 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH1P12830 AL732372.2-225ENST00000642124 456 ntBASIC3.49□□□□□ -1.85
CDH1P12830 AC058791.1-201ENST00000608412 3198 ntBASIC3.49□□□□□ -1.85
CDH1P12830 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH1P12830 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH1P12830 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH1P12830 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH1P12830 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH1P12830 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH1P12830 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CDH1P12830 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH1P12830 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CDH1P12830 AC007823.1-201ENST00000569932 1566 ntBASIC3.48□□□□□ -1.85
CDH1P12830 RNA5SP235-201ENST00000365411 114 ntBASIC3.48□□□□□ -1.85
CDH1P12830 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDH1P12830 RNU6-1207P-201ENST00000384343 107 ntBASIC3.48□□□□□ -1.85
CDH1P12830 Y_RNA.548-201ENST00000384656 105 ntBASIC3.48□□□□□ -1.85
CDH1P12830 MTHFD2P2-201ENST00000407725 247 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC078974.1-201ENST00000411597 223 ntBASIC3.48□□□□□ -1.85
CDH1P12830 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH1P12830 FCF1P9-201ENST00000412546 282 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH1P12830 AC005517.2-201ENST00000424673 553 ntBASIC3.48□□□□□ -1.85
CDH1P12830 OR2B8P-201ENST00000432841 938 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC007389.2-201ENST00000434630 306 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC009961.2-201ENST00000435771 251 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH1P12830 RPS3AP46-201ENST00000448352 682 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AL353691.1-201ENST00000451332 387 ntBASIC3.48□□□□□ -1.85
CDH1P12830 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH1P12830 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH1P12830 RPS20P24-201ENST00000457473 361 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC012170.1-201ENST00000495139 359 ntBASIC3.48□□□□□ -1.85
CDH1P12830 FCF1P3-201ENST00000496394 590 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AL358832.1-201ENST00000497800 389 ntBASIC3.48□□□□□ -1.85
CDH1P12830 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH1P12830 AC105252.1-201ENST00000503089 286 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC091133.4-201ENST00000511142 308 ntBASIC3.48□□□□□ -1.85
CDH1P12830 RNU6-27P-201ENST00000516146 107 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC023632.4-201ENST00000517783 191 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH1P12830 AC093331.1-201ENST00000521474 169 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH1P12830 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDH1P12830 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH1P12830 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
CDH1P12830 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH1P12830 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH1P12830 AL845331.3-202ENST00000562856 261 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AL157394.1-201ENST00000562983 1224 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH1P12830 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH1P12830 AL359999.1-201ENST00000604513 294 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AL161729.4-201ENST00000604650 476 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC006077.1-201ENST00000604746 343 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC105429.2-201ENST00000610567 517 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC091304.9-201ENST00000612091 226 ntBASIC3.48□□□□□ -1.85
CDH1P12830 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH1P12830 AL161637.1-201ENST00000622380 412 ntBASIC3.48□□□□□ -1.85
CDH1P12830 AC091925.2-201ENST00000625059 256 ntBASIC3.48□□□□□ -1.85
CDH1P12830 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms