Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PCNAP12004 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCNAP12004 Y_RNA.41-201ENST00000362646 102 ntBASIC3.66□□□□□ -1.82
PCNAP12004 RNU6-1074P-201ENST00000383995 104 ntBASIC3.66□□□□□ -1.82
PCNAP12004 SNORD3H-201ENST00000384486 214 ntBASIC3.66□□□□□ -1.82
PCNAP12004 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCNAP12004 RPS7P15-201ENST00000415804 584 ntBASIC3.66□□□□□ -1.82
PCNAP12004 ZNF885P-201ENST00000420174 1098 ntBASIC3.66□□□□□ -1.82
PCNAP12004 BEND7P1-201ENST00000422058 457 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AC233728.2-201ENST00000425348 757 ntBASIC3.66□□□□□ -1.82
PCNAP12004 ISCA1P6-201ENST00000427740 390 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.66□□□□□ -1.82
PCNAP12004 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.66□□□□□ -1.82
PCNAP12004 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.66□□□□□ -1.82
PCNAP12004 AC234775.1-201ENST00000454247 670 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.66□□□□□ -1.82
PCNAP12004 VN1R17P-201ENST00000472048 1090 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AC084198.1-201ENST00000477747 402 ntBASIC3.66□□□□□ -1.82
PCNAP12004 RN7SL323P-201ENST00000494712 295 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AC096751.1-202ENST00000502691 1067 ntBASIC3.66□□□□□ -1.82
PCNAP12004 HMGB1P22-201ENST00000505315 124 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.66□□□□□ -1.82
PCNAP12004 RAC1P2-201ENST00000511164 579 ntBASIC3.66□□□□□ -1.82
PCNAP12004 SUMO2P20-201ENST00000520803 283 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AP003392.2-201ENST00000527269 208 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AC007224.1-201ENST00000564410 144 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.66□□□□□ -1.82
PCNAP12004 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.66□□□□□ -1.82
PCNAP12004 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 AC068790.3-201ENST00000602988 553 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AL359999.1-201ENST00000604513 294 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AL137849.1-201ENST00000604767 169 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 AC091304.9-201ENST00000612091 226 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AL592295.2-201ENST00000612578 206 ntBASIC3.66□□□□□ -1.82
PCNAP12004 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
PCNAP12004 AL732618.1-201ENST00000623251 301 ntBASIC3.66□□□□□ -1.82
PCNAP12004 AC112200.1-201ENST00000625015 234 ntBASIC3.66□□□□□ -1.82
PCNAP12004 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.66□□□□□ -1.82
PCNAP12004 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCNAP12004 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCNAP12004 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCNAP12004 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCNAP12004 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCNAP12004 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.66□□□□□ -1.82
PCNAP12004 MTCO1P9-201ENST00000505577 1534 ntBASIC3.65□□□□□ -1.82
PCNAP12004 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PCNAP12004 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.65□□□□□ -1.83
PCNAP12004 GNG5P1-201ENST00000255500 204 ntBASIC3.65□□□□□ -1.83
PCNAP12004 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCNAP12004 EI24P2-201ENST00000397776 1076 ntBASIC3.65□□□□□ -1.83
PCNAP12004 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.65□□□□□ -1.83
PCNAP12004 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCNAP12004 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 USP9YP36-201ENST00000424581 829 ntBASIC3.65□□□□□ -1.83
PCNAP12004 AC019097.1-201ENST00000424783 735 ntBASIC3.65□□□□□ -1.83
PCNAP12004 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.65□□□□□ -1.83
PCNAP12004 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.65□□□□□ -1.83
PCNAP12004 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.65□□□□□ -1.83
PCNAP12004 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCNAP12004 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCNAP12004 AC109464.2-201ENST00000510242 943 ntBASIC3.65□□□□□ -1.83
PCNAP12004 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 RN7SKP83-201ENST00000516512 178 ntBASIC3.65□□□□□ -1.83
PCNAP12004 RNU6-352P-201ENST00000516908 107 ntBASIC3.65□□□□□ -1.83
PCNAP12004 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.65□□□□□ -1.83
PCNAP12004 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 AC125611.2-201ENST00000551907 647 ntBASIC3.65□□□□□ -1.83
PCNAP12004 SETP2-201ENST00000553886 926 ntBASIC3.65□□□□□ -1.83
PCNAP12004 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 AC009063.1-201ENST00000563342 702 ntBASIC3.65□□□□□ -1.83
PCNAP12004 MIR4286-201ENST00000580651 93 ntBASIC3.65□□□□□ -1.83
PCNAP12004 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.65□□□□□ -1.83
PCNAP12004 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.65□□□□□ -1.83
PCNAP12004 AC011468.4-201ENST00000603942 409 ntBASIC3.65□□□□□ -1.83
PCNAP12004 FP236240.3-201ENST00000623061 327 ntBASIC3.65□□□□□ -1.83
PCNAP12004 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.65□□□□□ -1.83
PCNAP12004 RNA5SP196-201ENST00000625967 102 ntBASIC3.65□□□□□ -1.83
PCNAP12004 MIR7153-201ENST00000637758 57 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms