Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.5□□□□□ -2.01
TOP2AP11388 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
TOP2AP11388 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TOP2AP11388 RNU6-603P-201ENST00000411403 107 ntBASIC2.49□□□□□ -2.01
TOP2AP11388 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.49□□□□□ -2.01
TOP2AP11388 AC106730.3-201ENST00000624568 641 ntBASIC2.49□□□□□ -2.01
TOP2AP11388 MAPK10-266ENST00000641066 6555 ntBASIC2.49□□□□□ -2.01
TOP2AP11388 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TOP2AP11388 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 MTCO3P21-201ENST00000430791 643 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 MTCO1P43-201ENST00000431831 488 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 XKRYP6-201ENST00000440468 1116 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 XKRYP3-201ENST00000442113 1116 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.48□□□□□ -2.01
TOP2AP11388 RNA5SP364-201ENST00000516938 78 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 AC022790.1-201ENST00000522872 204 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 AC234775.3-201ENST00000564612 656 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 RMST_2.1-201ENST00000617263 136 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.48□□□□□ -2.01
TOP2AP11388 MIR6767-201ENST00000637302 66 ntBASIC2.48□□□□□ -2.01
TOP2AP11388 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
TOP2AP11388 RNU6-146P-201ENST00000384602 108 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 PTP4A1P1-201ENST00000420539 515 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 AC135721.1-201ENST00000497954 479 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 SNX5P1-201ENST00000505757 1041 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 RPL37P25-201ENST00000507308 276 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 AC121758.2-201ENST00000553271 193 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 AC006270.2-201ENST00000578523 652 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 U73479.1-201ENST00000618062 168 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 OR5AQ1P-202ENST00000641257 1534 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TOP2AP11388 AC011477.1-204ENST00000623416 1325 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 AL445669.1-201ENST00000426743 755 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP2AP11388 AC090774.1-201ENST00000435925 246 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 AL451074.3-201ENST00000437709 472 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 Z99714.1-201ENST00000450463 807 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.47□□□□□ -2.01
TOP2AP11388 HMGB3P30-201ENST00000457863 606 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 AC025755.1-201ENST00000521306 278 ntBASIC2.47□□□□□ -2.01
TOP2AP11388 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.47□□□□□ -2.01
TOP2AP11388 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP2AP11388 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP2AP11388 RNA5SP393-201ENST00000363423 117 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 HMGB1P10-201ENST00000395823 563 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 RPL5P13-201ENST00000462840 709 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 AC135999.1-201ENST00000478962 479 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 AC034244.1-201ENST00000507687 207 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 AC093281.2-201ENST00000510153 597 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 AP005435.4-201ENST00000529514 284 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 AC007115.1-201ENST00000546853 234 ntBASIC2.46□□□□□ -2.02
TOP2AP11388 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TOP2AP11388 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TOP2AP11388 AL596028.1-201ENST00000326971 197 ntBASIC2.45□□□□□ -2.02
TOP2AP11388 MIR1304-201ENST00000408243 91 ntBASIC2.45□□□□□ -2.02
TOP2AP11388 AL365400.1-201ENST00000431854 640 ntBASIC2.45□□□□□ -2.02
TOP2AP11388 HMGN2P20-201ENST00000437531 273 ntBASIC2.45□□□□□ -2.02
TOP2AP11388 RPL23AP16-201ENST00000441715 421 ntBASIC2.45□□□□□ -2.02
TOP2AP11388 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP2AP11388 AC023424.2-201ENST00000493479 777 ntBASIC2.45□□□□□ -2.02
TOP2AP11388 TRAV28-201ENST00000557548 323 ntBASIC2.45□□□□□ -2.02
TOP2AP11388 AL359740.1-201ENST00000624340 592 ntBASIC2.45□□□□□ -2.02
TOP2AP11388 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP2AP11388 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TOP2AP11388 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.44□□□□□ -2.02
TOP2AP11388 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TOP2AP11388 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TOP2AP11388 AL136133.1-201ENST00000413694 376 ntBASIC2.44□□□□□ -2.02
TOP2AP11388 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TOP2AP11388 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.44□□□□□ -2.02
TOP2AP11388 GTF2IP7-202ENST00000436677 309 ntBASIC2.44□□□□□ -2.02
TOP2AP11388 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.44□□□□□ -2.02
TOP2AP11388 SNORA4-201ENST00000584302 138 ntBASIC2.44□□□□□ -2.02
TOP2AP11388 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TOP2AP11388 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TOP2AP11388 AP000567.1-201ENST00000406413 156 ntBASIC2.43□□□□□ -2.02
TOP2AP11388 AC109780.2-201ENST00000413467 845 ntBASIC2.43□□□□□ -2.02
TOP2AP11388 COX6CP12-201ENST00000446748 202 ntBASIC2.43□□□□□ -2.02
TOP2AP11388 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.43□□□□□ -2.02
TOP2AP11388 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.43□□□□□ -2.02
TOP2AP11388 RAC1P5-201ENST00000512182 576 ntBASIC2.43□□□□□ -2.02
TOP2AP11388 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.43□□□□□ -2.02
TOP2AP11388 NOP56P3-201ENST00000549457 385 ntBASIC2.43□□□□□ -2.02
TOP2AP11388 RNU1-93P-201ENST00000364704 169 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.42□□□□□ -2.02
TOP2AP11388 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.42□□□□□ -2.02
TOP2AP11388 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.42□□□□□ -2.02
TOP2AP11388 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.42□□□□□ -2.02
TOP2AP11388 AP004607.1-201ENST00000524456 203 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.42□□□□□ -2.02
TOP2AP11388 AC023813.2-201ENST00000564321 469 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 MIR4474-201ENST00000579189 78 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 AC091057.2-201ENST00000602594 792 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 AC090425.2-201ENST00000608818 501 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.42□□□□□ -2.02
TOP2AP11388 OR4G1P-203ENST00000641984 1631 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 RNU1-22P-201ENST00000363334 158 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.42□□□□□ -2.02
TOP2AP11388 RPS6P15-201ENST00000431996 751 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms