Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-301P-201ENST00000384277 107 ntBASIC2.2□□□□□ -2.06
CD28P10747 Y_RNA.578-201ENST00000390903 88 ntBASIC2.2□□□□□ -2.06
CD28P10747 SNRPEP2-201ENST00000397592 279 ntBASIC2.2□□□□□ -2.06
CD28P10747 AL356131.1-201ENST00000405826 414 ntBASIC2.2□□□□□ -2.06
CD28P10747 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CD28P10747 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CD28P10747 RNA5SP38-201ENST00000410750 119 ntBASIC2.2□□□□□ -2.06
CD28P10747 RNA5SP344-201ENST00000411081 104 ntBASIC2.2□□□□□ -2.06
CD28P10747 AC068533.2-201ENST00000411872 306 ntBASIC2.2□□□□□ -2.06
CD28P10747 AL161449.1-201ENST00000414531 1199 ntBASIC2.2□□□□□ -2.06
CD28P10747 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.2□□□□□ -2.06
CD28P10747 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.2□□□□□ -2.06
CD28P10747 BEND7P1-201ENST00000422058 457 ntBASIC2.2□□□□□ -2.06
CD28P10747 AC019178.2-201ENST00000423595 505 ntBASIC2.2□□□□□ -2.06
CD28P10747 AL589880.1-201ENST00000448271 287 ntBASIC2.2□□□□□ -2.06
CD28P10747 OFD1P3Y-201ENST00000453312 783 ntBASIC2.2□□□□□ -2.06
CD28P10747 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CD28P10747 OR4G11P-201ENST00000492842 939 ntBASIC2.2□□□□□ -2.06
CD28P10747 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.2□□□□□ -2.06
CD28P10747 TMEM251P1-201ENST00000503717 318 ntBASIC2.2□□□□□ -2.06
CD28P10747 AC114981.1-201ENST00000503897 678 ntBASIC2.2□□□□□ -2.06
CD28P10747 CBX3P3-201ENST00000508108 532 ntBASIC2.2□□□□□ -2.06
CD28P10747 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.2□□□□□ -2.06
CD28P10747 AC034159.1-201ENST00000513885 583 ntBASIC2.2□□□□□ -2.06
CD28P10747 RN7SKP43-201ENST00000516173 320 ntBASIC2.2□□□□□ -2.06
CD28P10747 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.2□□□□□ -2.06
CD28P10747 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.2□□□□□ -2.06
CD28P10747 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.2□□□□□ -2.06
CD28P10747 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.2□□□□□ -2.06
CD28P10747 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.2□□□□□ -2.06
CD28P10747 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.2□□□□□ -2.06
CD28P10747 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.2□□□□□ -2.06
CD28P10747 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CD28P10747 AL022067.1-201ENST00000602426 454 ntBASIC2.2□□□□□ -2.06
CD28P10747 AC096947.1-201ENST00000603233 470 ntBASIC2.2□□□□□ -2.06
CD28P10747 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.2□□□□□ -2.06
CD28P10747 BNIP3P31-201ENST00000604515 566 ntBASIC2.2□□□□□ -2.06
CD28P10747 AC073387.2-201ENST00000604797 784 ntBASIC2.2□□□□□ -2.06
CD28P10747 AC018645.2-201ENST00000609151 472 ntBASIC2.2□□□□□ -2.06
CD28P10747 AL138478.1-201ENST00000612252 832 ntBASIC2.2□□□□□ -2.06
CD28P10747 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CD28P10747 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.2□□□□□ -2.06
CD28P10747 IGHVIII-44-202ENST00000636235 289 ntBASIC2.2□□□□□ -2.06
CD28P10747 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CD28P10747 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CD28P10747 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.19□□□□□ -2.06
CD28P10747 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CD28P10747 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CD28P10747 AC109315.1-201ENST00000584143 1347 ntBASIC2.19□□□□□ -2.06
CD28P10747 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.19□□□□□ -2.06
CD28P10747 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
CD28P10747 AP002907.1-201ENST00000606361 1430 ntBASIC2.19□□□□□ -2.06
CD28P10747 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.19□□□□□ -2.06
CD28P10747 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CD28P10747 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CD28P10747 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CD28P10747 RNU1-112P-201ENST00000364401 164 ntBASIC2.19□□□□□ -2.06
CD28P10747 RNA5SP126-201ENST00000365092 109 ntBASIC2.19□□□□□ -2.06
CD28P10747 Y_RNA.408-201ENST00000383987 102 ntBASIC2.19□□□□□ -2.06
CD28P10747 RNU6-224P-201ENST00000384055 107 ntBASIC2.19□□□□□ -2.06
CD28P10747 SNORA1.3-201ENST00000384676 136 ntBASIC2.19□□□□□ -2.06
CD28P10747 RNU6-1000P-201ENST00000391066 106 ntBASIC2.19□□□□□ -2.06
CD28P10747 RPS4XP8-201ENST00000402039 771 ntBASIC2.19□□□□□ -2.06
CD28P10747 RNU2-47P-201ENST00000410649 186 ntBASIC2.19□□□□□ -2.06
CD28P10747 RNU2-42P-201ENST00000410697 113 ntBASIC2.19□□□□□ -2.06
CD28P10747 MRPS36P1-201ENST00000421291 307 ntBASIC2.19□□□□□ -2.06
CD28P10747 RPL27AP8-201ENST00000424277 446 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC019097.1-201ENST00000424783 735 ntBASIC2.19□□□□□ -2.06
CD28P10747 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.19□□□□□ -2.06
CD28P10747 ARL5AP4-201ENST00000430731 512 ntBASIC2.19□□□□□ -2.06
CD28P10747 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.19□□□□□ -2.06
CD28P10747 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.19□□□□□ -2.06
CD28P10747 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.19□□□□□ -2.06
CD28P10747 YWHAZP7-201ENST00000436906 631 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC005297.2-201ENST00000450430 606 ntBASIC2.19□□□□□ -2.06
CD28P10747 RNA5SP310-201ENST00000459084 116 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.19□□□□□ -2.06
CD28P10747 AP004217.1-201ENST00000480579 346 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC118282.1-201ENST00000506408 765 ntBASIC2.19□□□□□ -2.06
CD28P10747 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.19□□□□□ -2.06
CD28P10747 ARL4AP2-201ENST00000507378 601 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC113347.3-201ENST00000509113 148 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC006499.2-201ENST00000513470 337 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC010376.1-201ENST00000522101 334 ntBASIC2.19□□□□□ -2.06
CD28P10747 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.19□□□□□ -2.06
CD28P10747 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.19□□□□□ -2.06
CD28P10747 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.19□□□□□ -2.06
CD28P10747 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CD28P10747 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.19□□□□□ -2.06
CD28P10747 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.19□□□□□ -2.06
CD28P10747 AC010653.1-201ENST00000571108 881 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.19□□□□□ -2.06
CD28P10747 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.19□□□□□ -2.06
CD28P10747 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.19□□□□□ -2.06
CD28P10747 VN1R83P-201ENST00000595685 445 ntBASIC2.19□□□□□ -2.06
CD28P10747 MIR6076-201ENST00000617521 113 ntBASIC2.19□□□□□ -2.06
CD28P10747 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CD28P10747 AL121895.2-201ENST00000619558 447 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC084824.4-201ENST00000620106 731 ntBASIC2.19□□□□□ -2.06
CD28P10747 AC006111.3-201ENST00000622137 383 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms