Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RPL30P16-201ENST00000419341 429 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 UBE2V1P8-201ENST00000437166 265 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 MTCO1P27-201ENST00000448269 226 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC6P09630 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC6P09630 RNU7-136P-201ENST00000458819 69 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC6P09630 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC6P09630 RPL9P6-201ENST00000492764 598 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC023424.2-201ENST00000493479 777 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC6P09630 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC6P09630 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC6P09630 OR4R3P-201ENST00000525084 838 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 MTND4LP18-201ENST00000526864 291 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC6P09630 DEFB108A-201ENST00000530110 222 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC6P09630 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC6P09630 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC6P09630 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC6P09630 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC6P09630 SULT1C2P1-202ENST00000562418 459 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC137800.2-201ENST00000574375 120 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AP001180.3-201ENST00000582221 145 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 MIR4307-201ENST00000582802 84 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 MAGOH2P-202ENST00000584384 429 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXC6P09630 BNIP3P8-201ENST00000597863 560 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC010680.3-201ENST00000604215 520 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC6P09630 AC109347.2-201ENST00000610220 349 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HOXC6P09630 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC6P09630 DCAF13P1-201ENST00000495256 1330 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC006504.1-201ENST00000562493 3666 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC6P09630 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC6P09630 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC6P09630 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC6P09630 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC6P09630 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC6P09630 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
HOXC6P09630 RNU5A-6P-201ENST00000384136 116 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 RNU6-921P-201ENST00000384361 107 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 RNU6-441P-201ENST00000384545 106 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 RNU6-952P-201ENST00000391164 108 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 DSTNP4-201ENST00000399472 474 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HOXC6P09630 MIR320C1-201ENST00000408566 88 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 Y_RNA.598-201ENST00000410480 95 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC6P09630 AL138785.1-201ENST00000425821 331 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC6P09630 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC6P09630 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AL590365.1-201ENST00000450788 243 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 MTCO3P38-201ENST00000468910 766 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AC084357.1-201ENST00000473404 255 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AC004924.1-201ENST00000480160 781 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 KLRA1P-201ENST00000503499 986 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AC021678.1-201ENST00000505195 936 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC6P09630 RPL23AP94-201ENST00000512518 302 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 Vault.1-201ENST00000516474 102 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC6P09630 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.85□□□□□ -1.79
HOXC6P09630 AC135001.1-201ENST00000544546 283 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 RPS3AP4-201ENST00000555161 764 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AGGF1P8-201ENST00000562979 1000 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AC092325.1-201ENST00000566449 554 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 LARP7P3-201ENST00000579888 337 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC6P09630 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.85□□□□□ -1.79
HOXC6P09630 AC067852.3-201ENST00000589177 561 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC6P09630 AC073657.2-201ENST00000605661 303 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC6P09630 AC090970.3-201ENST00000612566 866 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AC090517.2-201ENST00000614966 680 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC6P09630 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AC138649.3-201ENST00000622154 254 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
HOXC6P09630 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC6P09630 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC6P09630 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HOXC6P09630 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC6P09630 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HOXC6P09630 AC107081.3-201ENST00000612715 2034 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 AC117529.2-201ENST00000512159 2068 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 TNPO1P3-201ENST00000436471 2662 ntBASIC3.85□□□□□ -1.79
HOXC6P09630 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC6P09630 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
HOXC6P09630 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
HOXC6P09630 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HOXC6P09630 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXC6P09630 RNU6-533P-201ENST00000384144 107 ntBASIC3.84□□□□□ -1.79
HOXC6P09630 ARF4P3-201ENST00000397387 509 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms