Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RSL24D1P8-201ENST00000434442 492 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AL138799.3-201ENST00000438968 350 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A2P08572 AC098799.2-201ENST00000509466 868 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 MTCO2P32-201ENST00000514865 403 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 IGKV2D-36-201ENST00000518643 226 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A2P08572 AC139103.1-201ENST00000534696 1030 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 OR4T1P-201ENST00000554933 911 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AC104229.1-201ENST00000561364 255 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AC103810.1-201ENST00000579873 453 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 VN1R88P-201ENST00000596787 292 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 RPL23AP78-201ENST00000599928 470 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 ZNF92P2-201ENST00000600543 1059 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.01□□□□□ -2.09
COL4A2P08572 AL671309.1-201ENST00000603750 544 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AC128687.1-201ENST00000605304 619 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 HSPE1P14-201ENST00000605812 302 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AC108479.2-201ENST00000617314 601 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 XIST_intron.1-201ENST00000619444 68 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.01□□□□□ -2.09
COL4A2P08572 AL356118.1-201ENST00000635272 1078 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
COL4A2P08572 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A2P08572 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A2P08572 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A2P08572 AP001148.1-201ENST00000624124 2359 ntBASIC2□□□□□ -2.09
COL4A2P08572 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL4A2P08572 Y_RNA.40-201ENST00000362645 93 ntBASIC2□□□□□ -2.09
COL4A2P08572 RNU6-457P-201ENST00000363999 107 ntBASIC2□□□□□ -2.09
COL4A2P08572 RNU6-629P-201ENST00000384061 103 ntBASIC2□□□□□ -2.09
COL4A2P08572 RNU6-1151P-201ENST00000384684 107 ntBASIC2□□□□□ -2.09
COL4A2P08572 RNU6-796P-201ENST00000391086 107 ntBASIC2□□□□□ -2.09
COL4A2P08572 SNORA40.18-201ENST00000391200 128 ntBASIC2□□□□□ -2.09
COL4A2P08572 DSTNP4-201ENST00000399472 474 ntBASIC2□□□□□ -2.09
COL4A2P08572 RNU2-37P-201ENST00000410695 177 ntBASIC2□□□□□ -2.09
COL4A2P08572 RPL7P46-201ENST00000425129 740 ntBASIC2□□□□□ -2.09
COL4A2P08572 AC006548.1-201ENST00000427470 102 ntBASIC2□□□□□ -2.09
COL4A2P08572 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2□□□□□ -2.09
COL4A2P08572 AC089999.1-201ENST00000460336 374 ntBASIC2□□□□□ -2.09
COL4A2P08572 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2□□□□□ -2.09
COL4A2P08572 AC027338.1-201ENST00000514840 825 ntBASIC2□□□□□ -2.09
COL4A2P08572 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2□□□□□ -2.09
COL4A2P08572 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2□□□□□ -2.09
COL4A2P08572 AC004217.3-201ENST00000551552 878 ntBASIC2□□□□□ -2.09
COL4A2P08572 PRELID2P1-201ENST00000552837 301 ntBASIC2□□□□□ -2.09
COL4A2P08572 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2□□□□□ -2.09
COL4A2P08572 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2□□□□□ -2.09
COL4A2P08572 MIR8070-201ENST00000616510 88 ntBASIC2□□□□□ -2.09
COL4A2P08572 RBM12B-AS1-201ENST00000623283 653 ntBASIC2□□□□□ -2.09
COL4A2P08572 AC092608.3-201ENST00000625017 386 ntBASIC2□□□□□ -2.09
COL4A2P08572 CR381572.1-201ENST00000625098 102 ntBASIC2□□□□□ -2.09
COL4A2P08572 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2□□□□□ -2.09
COL4A2P08572 HPVC1-201ENST00000629899 1198 ntBASIC2□□□□□ -2.09
COL4A2P08572 AC132825.7-201ENST00000638744 335 ntBASIC2□□□□□ -2.09
COL4A2P08572 AL163152.1-201ENST00000642001 374 ntBASIC2□□□□□ -2.09
COL4A2P08572 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
COL4A2P08572 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
COL4A2P08572 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL4A2P08572 PABPC1P7-201ENST00000413177 1513 ntBASIC2□□□□□ -2.09
COL4A2P08572 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL4A2P08572 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL4A2P08572 AL121972.1-201ENST00000402023 252 ntBASIC2□□□□□ -2.09
COL4A2P08572 LUZP4P1-201ENST00000415420 344 ntBASIC2□□□□□ -2.09
COL4A2P08572 VN1R42P-201ENST00000424651 344 ntBASIC2□□□□□ -2.09
COL4A2P08572 AC096632.1-201ENST00000427395 310 ntBASIC2□□□□□ -2.09
COL4A2P08572 AC104332.2-201ENST00000429959 156 ntBASIC2□□□□□ -2.09
COL4A2P08572 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2□□□□□ -2.09
COL4A2P08572 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2□□□□□ -2.09
COL4A2P08572 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2□□□□□ -2.09
COL4A2P08572 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2□□□□□ -2.09
COL4A2P08572 RNFT1P2-201ENST00000443064 757 ntBASIC2□□□□□ -2.09
COL4A2P08572 AL500527.1-201ENST00000448532 255 ntBASIC2□□□□□ -2.09
COL4A2P08572 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2□□□□□ -2.09
COL4A2P08572 AC007182.2-201ENST00000489251 402 ntBASIC2□□□□□ -2.09
COL4A2P08572 TMEM248P1-201ENST00000510579 951 ntBASIC2□□□□□ -2.09
COL4A2P08572 TTC39CP1-201ENST00000512513 755 ntBASIC2□□□□□ -2.09
COL4A2P08572 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2□□□□□ -2.09
COL4A2P08572 OR8K2P-201ENST00000524645 927 ntBASIC2□□□□□ -2.09
COL4A2P08572 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2□□□□□ -2.09
COL4A2P08572 AC090616.5-202ENST00000582111 297 ntBASIC2□□□□□ -2.09
COL4A2P08572 RPAP2P1-201ENST00000603626 1168 ntBASIC2□□□□□ -2.09
COL4A2P08572 BNIP3P4-201ENST00000604946 565 ntBASIC2□□□□□ -2.09
COL4A2P08572 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
COL4A2P08572 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
COL4A2P08572 MTCO1P6-201ENST00000481192 1384 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
COL4A2P08572 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A2P08572 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
COL4A2P08572 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A2P08572 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A2P08572 Y_RNA.338-201ENST00000365320 114 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 AL138880.1-201ENST00000405824 642 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 RNU4-27P-201ENST00000410889 139 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 RNU2-71P-201ENST00000411395 189 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A2P08572 AL445183.3-201ENST00000414168 502 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A2P08572 AL358453.1-201ENST00000422522 250 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms