Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RNU1-97P-201ENST00000516872 164 ntBASIC2.54□□□□□ -2
TPM3P06753 SNORA31.18-201ENST00000517043 134 ntBASIC2.54□□□□□ -2
TPM3P06753 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.54□□□□□ -2
TPM3P06753 COX6CP5-201ENST00000527162 228 ntBASIC2.54□□□□□ -2
TPM3P06753 ZNF705CP-201ENST00000530515 889 ntBASIC2.54□□□□□ -2
TPM3P06753 AC021269.2-201ENST00000532318 330 ntBASIC2.54□□□□□ -2
TPM3P06753 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.54□□□□□ -2
TPM3P06753 SNORD39.3-201ENST00000584451 71 ntBASIC2.54□□□□□ -2
TPM3P06753 AC073569.3-201ENST00000619055 682 ntBASIC2.54□□□□□ -2
TPM3P06753 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
TPM3P06753 AL031601.2-202ENST00000622650 282 ntBASIC2.54□□□□□ -2
TPM3P06753 AL109809.4-201ENST00000603520 2185 ntBASIC2.54□□□□□ -2
TPM3P06753 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.54□□□□□ -2
TPM3P06753 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TPM3P06753 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TPM3P06753 HSPE1P11-201ENST00000339579 310 ntBASIC2.53□□□□□ -2
TPM3P06753 OR5H15-201ENST00000383696 930 ntBASIC2.53□□□□□ -2
TPM3P06753 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
TPM3P06753 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
TPM3P06753 RN7SKP140-201ENST00000411196 284 ntBASIC2.53□□□□□ -2
TPM3P06753 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.53□□□□□ -2
TPM3P06753 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.53□□□□□ -2
TPM3P06753 UBE2V1P13-201ENST00000436983 439 ntBASIC2.53□□□□□ -2
TPM3P06753 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.53□□□□□ -2
TPM3P06753 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.53□□□□□ -2
TPM3P06753 AC087588.1-201ENST00000462203 316 ntBASIC2.53□□□□□ -2
TPM3P06753 AC090515.1-201ENST00000465295 476 ntBASIC2.53□□□□□ -2
TPM3P06753 AC109486.1-201ENST00000486833 374 ntBASIC2.53□□□□□ -2
TPM3P06753 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.53□□□□□ -2
TPM3P06753 AC093767.1-201ENST00000504523 156 ntBASIC2.53□□□□□ -2
TPM3P06753 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.53□□□□□ -2
TPM3P06753 MIR514B-201ENST00000516774 80 ntBASIC2.53□□□□□ -2
TPM3P06753 BTF3P12-201ENST00000519620 469 ntBASIC2.53□□□□□ -2
TPM3P06753 AC025755.1-201ENST00000521306 278 ntBASIC2.53□□□□□ -2
TPM3P06753 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.53□□□□□ -2
TPM3P06753 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.53□□□□□ -2
TPM3P06753 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.53□□□□□ -2
TPM3P06753 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.53□□□□□ -2
TPM3P06753 MIR3616-201ENST00000584070 92 ntBASIC2.53□□□□□ -2
TPM3P06753 AL451007.1-201ENST00000595491 289 ntBASIC2.53□□□□□ -2
TPM3P06753 AC006023.1-201ENST00000603944 259 ntBASIC2.53□□□□□ -2
TPM3P06753 AC007621.1-201ENST00000604544 437 ntBASIC2.53□□□□□ -2
TPM3P06753 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
TPM3P06753 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.53□□□□□ -2
TPM3P06753 AL442067.2-201ENST00000614033 363 ntBASIC2.53□□□□□ -2
TPM3P06753 AC004852.3-201ENST00000614131 326 ntBASIC2.53□□□□□ -2
TPM3P06753 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.53□□□□□ -2
TPM3P06753 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.53□□□□□ -2
TPM3P06753 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.53□□□□□ -2
TPM3P06753 AL365361.1-201ENST00000566942 3481 ntBASIC2.53□□□□□ -2
TPM3P06753 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
TPM3P06753 SNORA38-201ENST00000363946 132 ntBASIC2.52□□□□□ -2.01
TPM3P06753 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
TPM3P06753 RNU6-882P-201ENST00000391025 103 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AL009174.1-201ENST00000426577 416 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC093422.3-201ENST00000428506 305 ntBASIC2.52□□□□□ -2.01
TPM3P06753 RPS15AP28-201ENST00000435088 386 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC090774.1-201ENST00000435925 246 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AL714022.1-201ENST00000439897 151 ntBASIC2.52□□□□□ -2.01
TPM3P06753 RPL23AP16-201ENST00000441715 421 ntBASIC2.52□□□□□ -2.01
TPM3P06753 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM3P06753 RNU6-717P-201ENST00000459076 104 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC025033.1-201ENST00000463883 194 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC116337.2-201ENST00000477662 156 ntBASIC2.52□□□□□ -2.01
TPM3P06753 RPL31P60-201ENST00000478450 367 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC022493.1-201ENST00000492984 337 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC006390.1-201ENST00000508068 283 ntBASIC2.52□□□□□ -2.01
TPM3P06753 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM3P06753 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
TPM3P06753 IGJP1-201ENST00000522682 475 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.52□□□□□ -2.01
TPM3P06753 AC025918.2-201ENST00000558683 763 ntBASIC2.52□□□□□ -2.01
TPM3P06753 MIR5007-201ENST00000583098 95 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.52□□□□□ -2.01
TPM3P06753 AC079791.1-201ENST00000605356 973 ntBASIC2.52□□□□□ -2.01
TPM3P06753 OR2AS2P-201ENST00000606902 342 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC245100.7-201ENST00000609678 442 ntBASIC2.52□□□□□ -2.01
TPM3P06753 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TPM3P06753 AL160394.1-201ENST00000624765 724 ntBASIC2.52□□□□□ -2.01
TPM3P06753 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.52□□□□□ -2.01
TPM3P06753 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TPM3P06753 MTND4P35-201ENST00000604257 1375 ntBASIC2.51□□□□□ -2.01
TPM3P06753 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TPM3P06753 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TPM3P06753 RNU6-270P-201ENST00000364131 105 ntBASIC2.51□□□□□ -2.01
TPM3P06753 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM3P06753 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
TPM3P06753 MIR525-201ENST00000384978 85 ntBASIC2.51□□□□□ -2.01
TPM3P06753 MIR767-201ENST00000390228 109 ntBASIC2.51□□□□□ -2.01
TPM3P06753 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TPM3P06753 U3.20-201ENST00000390909 217 ntBASIC2.51□□□□□ -2.01
TPM3P06753 SNORA48.7-201ENST00000391302 135 ntBASIC2.51□□□□□ -2.01
TPM3P06753 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM3P06753 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TPM3P06753 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM3P06753 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TPM3P06753 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM3P06753 AC104164.3-201ENST00000467363 1258 ntBASIC2.51□□□□□ -2.01
TPM3P06753 EIF4EP3-201ENST00000498782 656 ntBASIC2.51□□□□□ -2.01
TPM3P06753 RNU6-798P-201ENST00000516912 103 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms