Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DEFB109C-201ENST00000382575 264 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 DEFB109B-201ENST00000382656 264 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 RNY1P14-201ENST00000384426 108 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 AC109583.1-201ENST00000432156 268 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.21□□□□□ -2.06
COL1A1P02452 MED6P1-201ENST00000439659 713 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.21□□□□□ -2.06
COL1A1P02452 AC114982.2-201ENST00000461396 358 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 HMGN1P28-201ENST00000521340 364 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 AC109635.4-202ENST00000531666 412 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.21□□□□□ -2.06
COL1A1P02452 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
COL1A1P02452 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
COL1A1P02452 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
COL1A1P02452 HMGB3P2-201ENST00000411913 584 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.2□□□□□ -2.06
COL1A1P02452 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.2□□□□□ -2.06
COL1A1P02452 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.2□□□□□ -2.06
COL1A1P02452 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL1A1P02452 RPL31P53-201ENST00000457065 348 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.2□□□□□ -2.06
COL1A1P02452 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.2□□□□□ -2.06
COL1A1P02452 AC108120.2-201ENST00000512973 294 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.2□□□□□ -2.06
COL1A1P02452 RNA5SP468-201ENST00000516782 93 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.2□□□□□ -2.06
COL1A1P02452 AP003717.3-201ENST00000544832 1180 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AC008687.2-201ENST00000597865 520 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 VN1R74P-201ENST00000613259 503 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AC068831.7-201ENST00000616954 363 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL1A1P02452 AC090617.7-201ENST00000623952 126 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AC106730.3-201ENST00000624568 641 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL1A1P02452 AP002907.1-201ENST00000606361 1430 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AL136520.1-201ENST00000600311 1322 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
COL1A1P02452 RNU6-50P-201ENST00000362356 103 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 RNA5SP325-201ENST00000363756 130 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL1A1P02452 RNU6-1181P-201ENST00000384191 106 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 RPS15AP12-201ENST00000419498 388 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AC092473.1-201ENST00000441098 221 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 USP9YP15-201ENST00000442391 422 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.2□□□□□ -2.06
COL1A1P02452 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.2□□□□□ -2.06
COL1A1P02452 AC092436.3-201ENST00000511788 257 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.2□□□□□ -2.06
COL1A1P02452 RNU6-56P-201ENST00000516986 93 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 MIR548Y-201ENST00000582739 110 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 MIR8081-201ENST00000611533 95 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 AC006249.1-201ENST00000621223 471 ntBASIC2.2□□□□□ -2.06
COL1A1P02452 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL1A1P02452 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
COL1A1P02452 RNU6-244P-201ENST00000391028 104 ntBASIC2.19□□□□□ -2.06
COL1A1P02452 AL591034.1-201ENST00000407447 340 ntBASIC2.19□□□□□ -2.06
COL1A1P02452 RPS15AP40-201ENST00000419621 391 ntBASIC2.19□□□□□ -2.06
COL1A1P02452 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.19□□□□□ -2.06
COL1A1P02452 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.19□□□□□ -2.06
COL1A1P02452 RPL31P20-201ENST00000449593 360 ntBASIC2.19□□□□□ -2.06
COL1A1P02452 AC090255.1-201ENST00000495779 349 ntBASIC2.19□□□□□ -2.06
COL1A1P02452 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.19□□□□□ -2.06
COL1A1P02452 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.19□□□□□ -2.06
COL1A1P02452 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.19□□□□□ -2.06
COL1A1P02452 MIR6779-201ENST00000617283 64 ntBASIC2.19□□□□□ -2.06
COL1A1P02452 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL1A1P02452 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.18□□□□□ -2.06
COL1A1P02452 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL1A1P02452 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.18□□□□□ -2.06
COL1A1P02452 AC109780.2-201ENST00000413467 845 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.18□□□□□ -2.06
COL1A1P02452 RPL23AP39-201ENST00000415533 405 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 AP1B1P2-201ENST00000416196 106 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 AC023128.2-201ENST00000420880 1223 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.18□□□□□ -2.06
COL1A1P02452 OR51AB1P-201ENST00000429046 620 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 DNAJC19P4-201ENST00000440115 345 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 DPPA3P1-201ENST00000448050 469 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 AL035407.2-201ENST00000454090 378 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL1A1P02452 AC090453.1-201ENST00000495560 436 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 MIR449C-201ENST00000516047 92 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 MTND2P26-201ENST00000528255 1029 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 SNORD84-203ENST00000584275 78 ntBASIC2.18□□□□□ -2.06
COL1A1P02452 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.18□□□□□ -2.06
COL1A1P02452 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.18□□□□□ -2.06
COL1A1P02452 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
COL1A1P02452 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.17□□□□□ -2.06
COL1A1P02452 RNU6-1077P-201ENST00000410506 102 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AC234782.4-201ENST00000417646 1048 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.17□□□□□ -2.06
COL1A1P02452 SNRPEP4-201ENST00000435815 279 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AC009238.1-201ENST00000442165 424 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AC009237.6-201ENST00000446969 424 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.17□□□□□ -2.06
COL1A1P02452 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.17□□□□□ -2.06
COL1A1P02452 AC096992.1-201ENST00000459808 709 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AC104115.2-201ENST00000523026 687 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms