Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 AC008507.2-201ENST00000588402 1176 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AL583856.2-201ENST00000606298 543 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 AC008083.4-201ENST00000615076 444 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AC009159.1-201ENST00000618386 642 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CPSF4O95639 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.12□□□□□ -2.07
CPSF4O95639 AC026634.1-201ENST00000634369 198 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AC090897.3-201ENST00000636973 1157 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.12□□□□□ -2.07
CPSF4O95639 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CPSF4O95639 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CPSF4O95639 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.12□□□□□ -2.07
CPSF4O95639 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4O95639 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.11□□□□□ -2.07
CPSF4O95639 RNU6-492P-201ENST00000363035 104 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4O95639 SNORA80E-201ENST00000384744 137 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 U3.26-201ENST00000391236 204 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC016769.3-201ENST00000396562 315 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 RPS4XP8-201ENST00000402039 771 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 RPL7P27-201ENST00000403775 720 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 RNU6-712P-201ENST00000410558 100 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC069282.1-201ENST00000411911 526 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 MTCO3P12-201ENST00000416718 547 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 MTCO3P1-205ENST00000422088 832 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4O95639 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
CPSF4O95639 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4O95639 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4O95639 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF4O95639 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF4O95639 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC009961.3-201ENST00000449832 765 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4O95639 RPS20P24-201ENST00000457473 361 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF4O95639 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4O95639 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.11□□□□□ -2.07
CPSF4O95639 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4O95639 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4O95639 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4O95639 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.11□□□□□ -2.07
CPSF4O95639 AC104417.1-201ENST00000523974 751 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 HSPE1P20-201ENST00000538133 289 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC090502.2-201ENST00000549267 280 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC126177.3-201ENST00000551839 688 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF4O95639 LRRC37A5P-203ENST00000580181 585 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4O95639 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.11□□□□□ -2.07
CPSF4O95639 RPL23AP78-201ENST00000599928 470 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 NRBF2P5-201ENST00000603087 788 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC008962.1-201ENST00000605729 304 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.11□□□□□ -2.07
CPSF4O95639 AC092954.1-201ENST00000609121 445 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AL512427.1-201ENST00000618593 349 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 AC080188.3-201ENST00000624842 748 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 CTSLP2-204ENST00000629029 392 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4O95639 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF4O95639 AL136520.1-201ENST00000600311 1322 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 NUP58P1-201ENST00000502546 1738 ntBASIC2.11□□□□□ -2.07
CPSF4O95639 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CPSF4O95639 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CPSF4O95639 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CPSF4O95639 HMGB1P5-201ENST00000255320 642 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 RNU6-1066P-201ENST00000363573 105 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 RNU6-236P-201ENST00000363886 106 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4O95639 SNORA67.4-201ENST00000384688 142 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 U3.29-201ENST00000391296 212 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CPSF4O95639 RNA5SP492-201ENST00000411330 114 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.1□□□□□ -2.07
CPSF4O95639 AC079780.1-201ENST00000428259 207 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC092393.1-201ENST00000439625 742 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4O95639 MTCO1P48-201ENST00000448024 1096 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.1□□□□□ -2.07
CPSF4O95639 snoU13.4-201ENST00000458916 104 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 RPS23P3-201ENST00000470993 430 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC013828.1-201ENST00000481845 158 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 GZMAP1-201ENST00000503054 631 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4O95639 AC008837.1-201ENST00000511513 412 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC109329.2-201ENST00000519658 482 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 MTCO3P15-201ENST00000526563 574 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 OR4P1P-201ENST00000530808 1136 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC068339.2-201ENST00000534395 618 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.1□□□□□ -2.07
CPSF4O95639 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms