Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RNU6-188P-201ENST00000364207 107 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLSTN1O94985 SDHCP2-201ENST00000398565 501 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLSTN1O94985 RPS23P10-201ENST00000416185 486 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 USP12PX-201ENST00000432383 1057 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 HLA-N-201ENST00000437516 135 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.8□□□□□ -1.64
CLSTN1O94985 TXNP1-201ENST00000441872 371 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.8□□□□□ -1.64
CLSTN1O94985 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.8□□□□□ -1.64
CLSTN1O94985 PHBP16-201ENST00000446318 950 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 MTND2P24-201ENST00000453434 806 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AL513533.1-201ENST00000453728 415 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 RPS23P3-201ENST00000470993 430 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AC007182.2-201ENST00000489251 402 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.8□□□□□ -1.64
CLSTN1O94985 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.8□□□□□ -1.64
CLSTN1O94985 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.8□□□□□ -1.64
CLSTN1O94985 AC093840.1-201ENST00000511599 336 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 RNU6-506P-201ENST00000516553 94 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.8□□□□□ -1.64
CLSTN1O94985 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.8□□□□□ -1.64
CLSTN1O94985 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.8□□□□□ -1.64
CLSTN1O94985 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.8□□□□□ -1.64
CLSTN1O94985 AC107016.1-201ENST00000550463 337 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 SUB1P2-201ENST00000556401 297 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 DPPA3P3-201ENST00000603842 430 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AC067959.1-201ENST00000604334 379 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 SNORA51-201ENST00000606420 132 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AP002826.1-201ENST00000608835 315 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 MIR6748-201ENST00000610433 71 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AC124864.2-201ENST00000624736 186 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.8□□□□□ -1.64
CLSTN1O94985 MIR4275-201ENST00000636486 87 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CLSTN1O94985 OR5H6-203ENST00000642105 978 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLSTN1O94985 CPHL1P-201ENST00000461341 3407 ntBASIC4.8□□□□□ -1.64
CLSTN1O94985 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLSTN1O94985 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLSTN1O94985 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLSTN1O94985 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLSTN1O94985 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLSTN1O94985 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.79□□□□□ -1.64
CLSTN1O94985 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLSTN1O94985 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLSTN1O94985 RNU6-1284P-201ENST00000363701 100 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 RNA5SP447-201ENST00000363749 119 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 RNU5E-6P-201ENST00000365574 115 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 RNU6-701P-201ENST00000384059 107 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 RN7SKP140-201ENST00000411196 284 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 RPL7L1P10-201ENST00000427790 463 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.79□□□□□ -1.64
CLSTN1O94985 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AC023194.1-201ENST00000493084 308 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AC105914.1-201ENST00000511798 226 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AC010493.1-201ENST00000513479 292 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.79□□□□□ -1.64
CLSTN1O94985 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.79□□□□□ -1.64
CLSTN1O94985 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AL355836.1-201ENST00000555951 870 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 RPL21P12-201ENST00000559810 515 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AC084783.1-201ENST00000565846 910 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.79□□□□□ -1.64
CLSTN1O94985 MIR4715-201ENST00000584117 79 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.79□□□□□ -1.64
CLSTN1O94985 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AC019193.2-201ENST00000610012 634 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.79□□□□□ -1.64
CLSTN1O94985 MLECP1-201ENST00000615893 709 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AL138721.1-201ENST00000616756 179 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLSTN1O94985 AC007546.2-201ENST00000623996 360 ntBASIC4.79□□□□□ -1.64
CLSTN1O94985 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.79□□□□□ -1.64
CLSTN1O94985 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.79□□□□□ -1.64
CLSTN1O94985 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLSTN1O94985 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLSTN1O94985 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.79□□□□□ -1.64
CLSTN1O94985 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLSTN1O94985 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
CLSTN1O94985 MIR129-1-201ENST00000384972 72 ntBASIC4.78□□□□□ -1.64
CLSTN1O94985 MIR514A1-201ENST00000385133 98 ntBASIC4.78□□□□□ -1.64
CLSTN1O94985 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLSTN1O94985 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLSTN1O94985 RNU4-55P-201ENST00000410731 137 ntBASIC4.78□□□□□ -1.64
CLSTN1O94985 AC016397.1-201ENST00000412463 242 ntBASIC4.78□□□□□ -1.64
CLSTN1O94985 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.78□□□□□ -1.64
CLSTN1O94985 YPEL5P1-201ENST00000419731 367 ntBASIC4.78□□□□□ -1.64
CLSTN1O94985 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.78□□□□□ -1.64
CLSTN1O94985 RPL23AP1-201ENST00000428990 471 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms