Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.1□□□□□ -1.59
CPNE3O75131 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CPNE3O75131 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.1□□□□□ -1.59
CPNE3O75131 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CPNE3O75131 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CPNE3O75131 SNORA17.1-201ENST00000362945 126 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 Y_RNA.455-201ENST00000384230 98 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 MIR578-201ENST00000384828 96 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 MIR517A-201ENST00000385001 87 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 HSPA8P15-201ENST00000401676 786 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 DUTP5-201ENST00000406790 469 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.1□□□□□ -1.59
CPNE3O75131 EIF4A1P3-201ENST00000411521 244 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.1□□□□□ -1.59
CPNE3O75131 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.1□□□□□ -1.59
CPNE3O75131 H2AFZP6-201ENST00000444403 394 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CPNE3O75131 AC092754.1-201ENST00000472975 479 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 RN7SL826P-201ENST00000479724 288 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.1□□□□□ -1.59
CPNE3O75131 AC116655.1-201ENST00000508324 901 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 AP004607.2-201ENST00000533949 322 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.1□□□□□ -1.59
CPNE3O75131 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.1□□□□□ -1.59
CPNE3O75131 AC091516.1-201ENST00000549191 703 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.1□□□□□ -1.59
CPNE3O75131 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.1□□□□□ -1.59
CPNE3O75131 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.1□□□□□ -1.59
CPNE3O75131 AL161670.1-201ENST00000554348 137 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.1□□□□□ -1.59
CPNE3O75131 AC005592.1-201ENST00000566527 1640 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 MIR3691-201ENST00000578066 90 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CPNE3O75131 MIR4472-2-201ENST00000582069 67 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 MIR548AC-201ENST00000585049 88 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.1□□□□□ -1.59
CPNE3O75131 AL158163.1-201ENST00000603915 1649 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 RNU6-85P-201ENST00000605989 107 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 HMGN2P28-201ENST00000606102 262 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 AC034102.8-201ENST00000615146 484 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.1□□□□□ -1.59
CPNE3O75131 AL031601.2-202ENST00000622650 282 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 AC006065.5-201ENST00000623427 349 ntBASIC5.1□□□□□ -1.59
CPNE3O75131 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.1□□□□□ -1.59
CPNE3O75131 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.1□□□□□ -1.59
CPNE3O75131 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CPNE3O75131 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CPNE3O75131 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CPNE3O75131 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CPNE3O75131 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CPNE3O75131 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CPNE3O75131 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.09□□□□□ -1.59
CPNE3O75131 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.09□□□□□ -1.59
CPNE3O75131 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.09□□□□□ -1.59
CPNE3O75131 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.09□□□□□ -1.59
CPNE3O75131 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.09□□□□□ -1.59
CPNE3O75131 RNU1-115P-201ENST00000365329 160 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 RNU6-1329P-201ENST00000365664 107 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 Y_RNA.534-201ENST00000384599 112 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 MIR105-1-201ENST00000385222 81 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 AC063979.1-201ENST00000415539 377 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.09□□□□□ -1.59
CPNE3O75131 EI24P4-201ENST00000423683 1078 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.09□□□□□ -1.59
CPNE3O75131 HMGB1P9-201ENST00000429856 646 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 AL360271.2-201ENST00000447710 161 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 RPS15AP34-201ENST00000487776 387 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.09□□□□□ -1.59
CPNE3O75131 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 AC104576.1-201ENST00000524225 88 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 GNAI2P1-201ENST00000541815 315 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 AC092447.9-201ENST00000603395 144 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 AC008814.1-201ENST00000603797 406 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 AL355598.1-201ENST00000604169 202 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 SNORD91B-202ENST00000608459 222 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPNE3O75131 IRF5P1-201ENST00000504852 2164 ntBASIC5.09□□□□□ -1.59
CPNE3O75131 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.09□□□□□ -1.6
CPNE3O75131 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.09□□□□□ -1.6
CPNE3O75131 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CPNE3O75131 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CPNE3O75131 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.08□□□□□ -1.6
CPNE3O75131 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CPNE3O75131 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CPNE3O75131 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CPNE3O75131 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.08□□□□□ -1.6
CPNE3O75131 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CPNE3O75131 AC114947.2-201ENST00000565748 2125 ntBASIC5.08□□□□□ -1.6
CPNE3O75131 AL078621.3-201ENST00000623707 2042 ntBASIC5.08□□□□□ -1.6
CPNE3O75131 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CPNE3O75131 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms