Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 AC073614.1-201ENST00000438690 650 ntBASIC3.56□□□□□ -1.84
LDB3O75112 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB3O75112 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 snoU109.1-201ENST00000459339 135 ntBASIC3.56□□□□□ -1.84
LDB3O75112 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB3O75112 TRBV12-2-201ENST00000489763 344 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC091951.2-201ENST00000500762 203 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC008628.2-201ENST00000502605 298 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB3O75112 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LDB3O75112 BTF3L4P4-201ENST00000506381 449 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC093677.1-201ENST00000514414 678 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB3O75112 FAM92A1P1-201ENST00000528023 890 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.56□□□□□ -1.84
LDB3O75112 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB3O75112 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB3O75112 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB3O75112 AC006270.2-201ENST00000578523 652 ntBASIC3.56□□□□□ -1.84
LDB3O75112 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 HMGN1P30-201ENST00000589286 268 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB3O75112 AL020997.2-201ENST00000602607 184 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC068790.5-201ENST00000602741 355 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AL137849.1-201ENST00000604767 169 ntBASIC3.56□□□□□ -1.84
LDB3O75112 MIR486-1-201ENST00000612171 68 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC005344.1-201ENST00000613391 459 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC104260.1-201ENST00000616660 539 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC002553.4-201ENST00000616896 331 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB3O75112 AL596245.1-201ENST00000618994 362 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB3O75112 C2orf27A-204ENST00000623058 969 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC110994.2-201ENST00000635481 492 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC138649.5-201ENST00000637456 137 ntBASIC3.56□□□□□ -1.84
LDB3O75112 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.56□□□□□ -1.84
LDB3O75112 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB3O75112 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB3O75112 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LDB3O75112 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 AL049780.3-201ENST00000624612 1583 ntBASIC3.55□□□□□ -1.84
LDB3O75112 CASC19-280ENST00000642102 1351 ntBASIC3.55□□□□□ -1.84
LDB3O75112 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB3O75112 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.55□□□□□ -1.84
LDB3O75112 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB3O75112 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LDB3O75112 OR5J1P-201ENST00000313544 939 ntBASIC3.55□□□□□ -1.84
LDB3O75112 Y_RNA.9-201ENST00000362354 101 ntBASIC3.55□□□□□ -1.84
LDB3O75112 RNY4P14-201ENST00000363656 96 ntBASIC3.55□□□□□ -1.84
LDB3O75112 RNU6-263P-201ENST00000363811 107 ntBASIC3.55□□□□□ -1.84
LDB3O75112 RNY4P34-201ENST00000364779 95 ntBASIC3.55□□□□□ -1.84
LDB3O75112 Y_RNA.296-201ENST00000364930 108 ntBASIC3.55□□□□□ -1.84
LDB3O75112 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB3O75112 RNU1-89P-201ENST00000384592 164 ntBASIC3.55□□□□□ -1.84
LDB3O75112 RNU6-114P-201ENST00000384704 105 ntBASIC3.55□□□□□ -1.84
LDB3O75112 MT-TL1-201ENST00000386347 75 ntBASIC3.55□□□□□ -1.84
LDB3O75112 RNU6-837P-201ENST00000391056 108 ntBASIC3.55□□□□□ -1.84
LDB3O75112 GSTA9P-201ENST00000406231 611 ntBASIC3.55□□□□□ -1.84
LDB3O75112 Y_RNA.608-201ENST00000410647 95 ntBASIC3.55□□□□□ -1.84
LDB3O75112 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AL139247.1-201ENST00000422768 325 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB3O75112 AL591419.1-201ENST00000427423 339 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AC006548.1-201ENST00000427470 102 ntBASIC3.55□□□□□ -1.84
LDB3O75112 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB3O75112 USP12PX-201ENST00000432383 1057 ntBASIC3.55□□□□□ -1.84
LDB3O75112 MTCYBP45-201ENST00000435243 565 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB3O75112 USP9YP8-201ENST00000441913 500 ntBASIC3.55□□□□□ -1.84
LDB3O75112 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB3O75112 RPL7P52-201ENST00000449200 742 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB3O75112 Z82190.1-201ENST00000454534 490 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB3O75112 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB3O75112 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LDB3O75112 AC078918.1-201ENST00000498515 228 ntBASIC3.55□□□□□ -1.84
LDB3O75112 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB3O75112 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB3O75112 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB3O75112 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB3O75112 RNA5SP164-201ENST00000516533 110 ntBASIC3.55□□□□□ -1.84
LDB3O75112 RNU2-46P-201ENST00000517038 113 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB3O75112 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB3O75112 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.55□□□□□ -1.84
LDB3O75112 RAB11AP2-201ENST00000545905 639 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.55□□□□□ -1.84
LDB3O75112 RPL21P5-201ENST00000554662 472 ntBASIC3.55□□□□□ -1.84
LDB3O75112 ANP32BP3-201ENST00000559213 706 ntBASIC3.55□□□□□ -1.84
LDB3O75112 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB3O75112 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB3O75112 AC010928.3-201ENST00000587712 541 ntBASIC3.55□□□□□ -1.84
LDB3O75112 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms