Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC112220.3-201ENST00000605502 502 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 SCARNA15.3-201ENST00000626315 122 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 SCARNA4.1-201ENST00000628597 123 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 LRRC77P-213ENST00000637727 880 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC068137.3-201ENST00000639191 341 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC073869.6-201ENST00000640656 341 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.45□□□□□ -1.86
CACNA1FO60840 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.45□□□□□ -1.86
CACNA1FO60840 RNU6-553P-201ENST00000364047 96 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 RNU6-707P-201ENST00000364647 95 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 Y_RNA.559-201ENST00000384686 107 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 MIR34A-201ENST00000385130 110 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 CYCSP45-201ENST00000402289 315 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.45□□□□□ -1.86
CACNA1FO60840 AL139421.1-201ENST00000423010 169 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 AC093155.1-201ENST00000440164 826 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 RPL23AP76-201ENST00000441860 458 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 FTH1P25-201ENST00000447665 469 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 RN7SL297P-201ENST00000483161 293 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC104687.1-201ENST00000485829 412 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 AC104108.1-201ENST00000509930 412 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC010587.2-201ENST00000511727 448 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 AC079600.2-201ENST00000550076 130 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 AL512347.1-201ENST00000566420 503 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 MIR3162-201ENST00000581818 82 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 MIR3605-201ENST00000583214 100 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC067852.4-201ENST00000590314 478 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 VN1R88P-201ENST00000596787 292 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AL357078.3-201ENST00000607528 618 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC004832.5-201ENST00000608677 401 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC099842.1-201ENST00000619919 596 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CACNA1FO60840 AL356057.3-201ENST00000402607 340 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 Y_RNA.604-201ENST00000410574 102 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.44□□□□□ -1.86
CACNA1FO60840 AL159169.1-201ENST00000421119 127 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 MRPS36P1-201ENST00000421291 307 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 AC008065.1-201ENST00000428525 348 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.44□□□□□ -1.86
CACNA1FO60840 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.44□□□□□ -1.86
CACNA1FO60840 NDUFS5P3-201ENST00000450668 321 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.44□□□□□ -1.86
CACNA1FO60840 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.44□□□□□ -1.86
CACNA1FO60840 SRRM1P2-201ENST00000464531 1192 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CACNA1FO60840 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.44□□□□□ -1.86
CACNA1FO60840 RNA5SP356-201ENST00000515972 94 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 RNU6-720P-201ENST00000516363 108 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 AC134698.4-201ENST00000523451 826 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CACNA1FO60840 AL512310.1-201ENST00000548639 172 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.44□□□□□ -1.86
CACNA1FO60840 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.44□□□□□ -1.86
CACNA1FO60840 MIR3611-201ENST00000584484 83 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 AC006023.1-201ENST00000603944 259 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 AC092794.1-201ENST00000612734 582 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CACNA1FO60840 AL607023.1-201ENST00000620045 248 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 AC010338.1-201ENST00000621823 717 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.44□□□□□ -1.86
CACNA1FO60840 AC046144.1-201ENST00000478559 1853 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CACNA1FO60840 AC011477.1-204ENST00000623416 1325 ntBASIC3.44□□□□□ -1.86
CACNA1FO60840 Y_RNA.302-201ENST00000364997 102 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 Y_RNA.408-201ENST00000383987 102 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AL031577.2-201ENST00000404133 280 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.43□□□□□ -1.86
CACNA1FO60840 RNA5SP239-201ENST00000410218 129 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 RNA5SP80-201ENST00000410475 111 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 RNU2-6P-201ENST00000411404 190 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC022028.1-201ENST00000412054 408 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.43□□□□□ -1.86
CACNA1FO60840 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 MTCYBP5-201ENST00000423752 1135 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 ATP5F1P1-201ENST00000433775 569 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 BMI1P1-201ENST00000445879 941 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 OR6C5P-201ENST00000452388 923 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1FO60840 PNPLA4P1-201ENST00000458328 305 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 RPL23AP94-201ENST00000512518 302 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 MTND1P5-201ENST00000517906 940 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1FO60840 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 POLR2KP1-201ENST00000553226 168 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC245505.1-201ENST00000556398 224 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.43□□□□□ -1.86
CACNA1FO60840 ATP5F1P7-201ENST00000567330 760 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms