Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.35□□□□□ -1.55
GRIN3BO60391 AC091885.1-201ENST00000506658 268 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 RNA5SP497-201ENST00000516081 97 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 RNA5SP519-201ENST00000516480 119 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 IGLVIV-53-201ENST00000520107 367 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.35□□□□□ -1.55
GRIN3BO60391 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.35□□□□□ -1.55
GRIN3BO60391 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.35□□□□□ -1.55
GRIN3BO60391 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.35□□□□□ -1.55
GRIN3BO60391 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.35□□□□□ -1.55
GRIN3BO60391 AC106782.4-201ENST00000568264 210 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.35□□□□□ -1.55
GRIN3BO60391 LLPHP1-201ENST00000603571 367 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.35□□□□□ -1.55
GRIN3BO60391 AL590099.1-201ENST00000615276 138 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 MIR6891-201ENST00000618788 93 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 AL034408.1-202ENST00000636088 415 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.35□□□□□ -1.55
GRIN3BO60391 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.35□□□□□ -1.55
GRIN3BO60391 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
GRIN3BO60391 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
GRIN3BO60391 SAGE2P-201ENST00000420011 2126 ntBASIC5.35□□□□□ -1.55
GRIN3BO60391 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
GRIN3BO60391 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GRIN3BO60391 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
GRIN3BO60391 AL139276.1-201ENST00000311910 1001 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 Y_RNA.67-201ENST00000362870 100 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 RNU6-511P-201ENST00000363496 107 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 RNU6-1279P-201ENST00000383917 103 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 Y_RNA.474-201ENST00000384341 102 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 SNORA57.3-201ENST00000411095 141 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 MTCYBP8-201ENST00000422855 651 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.34□□□□□ -1.55
GRIN3BO60391 AL589765.3-201ENST00000446084 462 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.34□□□□□ -1.55
GRIN3BO60391 AL121877.1-201ENST00000453704 622 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 AC007547.1-201ENST00000462177 490 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 AC008481.1-201ENST00000463278 396 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.34□□□□□ -1.55
GRIN3BO60391 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.34□□□□□ -1.55
GRIN3BO60391 RNU2-10P-201ENST00000516375 211 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 RN7SKP219-201ENST00000516825 296 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.34□□□□□ -1.55
GRIN3BO60391 AC093012.1-202ENST00000549403 582 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 AL121992.2-201ENST00000606262 256 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 RNU6-89P-201ENST00000606519 100 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 MIR6500-201ENST00000622700 86 ntBASIC5.34□□□□□ -1.55
GRIN3BO60391 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.34□□□□□ -1.55
GRIN3BO60391 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.34□□□□□ -1.55
GRIN3BO60391 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.34□□□□□ -1.55
GRIN3BO60391 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
GRIN3BO60391 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GRIN3BO60391 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
GRIN3BO60391 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.34□□□□□ -1.56
GRIN3BO60391 AC104623.2-202ENST00000623477 4002 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
GRIN3BO60391 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
GRIN3BO60391 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
GRIN3BO60391 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
GRIN3BO60391 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.33□□□□□ -1.56
GRIN3BO60391 AL731532.2-201ENST00000623542 1953 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.33□□□□□ -1.56
GRIN3BO60391 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIN3BO60391 AL157831.1-201ENST00000426134 473 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 MTCO2P12-201ENST00000427426 682 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 RPL7L1P1-201ENST00000448259 785 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 AL451050.1-201ENST00000450126 415 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 RNU7-182P-201ENST00000459009 62 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 RPL23AP11-201ENST00000475260 469 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIN3BO60391 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.33□□□□□ -1.56
GRIN3BO60391 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.33□□□□□ -1.56
GRIN3BO60391 RNU6-327P-201ENST00000516270 127 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 RNU6-1045P-201ENST00000516321 107 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 RNU1-103P-201ENST00000516502 125 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.33□□□□□ -1.56
GRIN3BO60391 AP000857.1-201ENST00000532151 543 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.33□□□□□ -1.56
GRIN3BO60391 AP001029.3-201ENST00000588063 596 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.33□□□□□ -1.56
GRIN3BO60391 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 AL133255.1-201ENST00000606374 441 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 AL365204.3-201ENST00000612448 685 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 C2orf27A-204ENST00000623058 969 ntBASIC5.33□□□□□ -1.56
GRIN3BO60391 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
GRIN3BO60391 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
GRIN3BO60391 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIN3BO60391 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIN3BO60391 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIN3BO60391 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIN3BO60391 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.33□□□□□ -1.56
GRIN3BO60391 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
GRIN3BO60391 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
GRIN3BO60391 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIN3BO60391 Z82217.1-201ENST00000625157 8149 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIN3BO60391 ZNF285B-201ENST00000561698 1767 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIN3BO60391 Y_RNA.419-201ENST00000384041 102 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 SNORD51-201ENST00000384320 80 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms