Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 Y_RNA.646-201ENST00000410980 101 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 ATG3P1-201ENST00000419507 911 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 OR2AH1P-201ENST00000425717 928 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 H2AFZP5-201ENST00000446960 382 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 snoU13.1-201ENST00000459157 104 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 AL049714.1-201ENST00000466686 347 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 PABPC1P3-201ENST00000469174 459 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 RPL12P20-201ENST00000475538 479 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC068781.1-201ENST00000488231 618 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 RPL36AP41-201ENST00000493820 306 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 RPS27P27-201ENST00000498779 255 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC092436.1-201ENST00000506450 503 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC079140.5-201ENST00000507882 310 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 SNORD116-26-201ENST00000516006 96 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 RNU6-1143P-201ENST00000516125 104 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC103843.2-201ENST00000530523 682 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 LARP7P2-201ENST00000575306 125 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 MIR5096-201ENST00000583713 70 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC017100.2-201ENST00000584628 355 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC006272.2-201ENST00000594725 163 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 U2.1-201ENST00000618978 145 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 PLCE1P1-201ENST00000622094 305 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC007529.1-201ENST00000418574 2178 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRICKLE3O43900 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRICKLE3O43900 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRICKLE3O43900 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRICKLE3O43900 AC000374.1-201ENST00000434698 1745 ntBASIC4.52□□□□□ -1.69
PRICKLE3O43900 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.52□□□□□ -1.69
PRICKLE3O43900 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRICKLE3O43900 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRICKLE3O43900 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 Y_RNA.22-201ENST00000362492 102 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 Y_RNA.126-201ENST00000363382 111 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 SNORD113-7-201ENST00000363762 77 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 RNA5SP479-201ENST00000364858 117 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 SNORA70F-201ENST00000384142 135 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 MIR298-201ENST00000401212 88 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 RNU2-29P-201ENST00000410423 189 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC080125.1-201ENST00000414888 684 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC092832.1-201ENST00000422934 400 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC010881.1-201ENST00000433830 235 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 TDGF1P1-201ENST00000445734 527 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 MTND1P17-201ENST00000448961 204 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 HMGN3P1-201ENST00000453847 193 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 RPL22P13-201ENST00000493291 347 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 TRBVA-201ENST00000498804 316 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 RNU6-513P-201ENST00000516104 104 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC007375.1-201ENST00000554513 578 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 MIR4775-201ENST00000581168 75 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC104695.3-201ENST00000604052 296 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 AC138627.2-201ENST00000624202 601 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRICKLE3O43900 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRICKLE3O43900 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRICKLE3O43900 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 A2MP1-204ENST00000566278 4130 ntBASIC4.51□□□□□ -1.69
PRICKLE3O43900 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PRICKLE3O43900 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms