Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.18□□□□□ -1.42
ACTN4O43707 AL450023.1-201ENST00000450868 751 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 RPL23AP81-201ENST00000455252 467 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 AC090602.1-201ENST00000469695 252 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.18□□□□□ -1.42
ACTN4O43707 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 SCARNA20.4-201ENST00000516969 131 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.18□□□□□ -1.42
ACTN4O43707 TOMM20P1-201ENST00000534518 427 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 MRPS18CP4-201ENST00000535821 231 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.18□□□□□ -1.42
ACTN4O43707 AC007458.1-201ENST00000542812 373 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.18□□□□□ -1.42
ACTN4O43707 FKBP1BP1-201ENST00000553366 325 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.18□□□□□ -1.42
ACTN4O43707 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.18□□□□□ -1.42
ACTN4O43707 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.18□□□□□ -1.42
ACTN4O43707 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ACTN4O43707 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.18□□□□□ -1.42
ACTN4O43707 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ACTN4O43707 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.17□□□□□ -1.42
ACTN4O43707 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 AC007785.2-201ENST00000598627 1916 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 AC007529.1-201ENST00000418574 2178 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.17□□□□□ -1.42
ACTN4O43707 OR13C1P-202ENST00000641378 2919 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 AL022311.1-201ENST00000623726 19416 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
ACTN4O43707 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ACTN4O43707 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 MIR133A2-201ENST00000347538 102 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 RNU6-290P-201ENST00000365212 101 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 RNU6-1035P-201ENST00000384477 107 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 MIR521-1-201ENST00000384902 87 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ACTN4O43707 SNORA53-201ENST00000391141 249 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 BMS1P22-201ENST00000414726 313 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.17□□□□□ -1.42
ACTN4O43707 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.17□□□□□ -1.42
ACTN4O43707 BX679664.1-201ENST00000434429 253 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.17□□□□□ -1.42
ACTN4O43707 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.17□□□□□ -1.42
ACTN4O43707 RPL30P10-201ENST00000488148 337 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 RPL30P11-201ENST00000495304 339 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 NDUFB5P1-201ENST00000508134 564 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 AC016065.2-201ENST00000514530 444 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 RNU6-496P-201ENST00000516145 99 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 AC103783.1-201ENST00000520506 373 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 CR383656.7-201ENST00000548164 174 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC6.17□□□□□ -1.42
ACTN4O43707 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.17□□□□□ -1.42
ACTN4O43707 AC098826.3-201ENST00000603823 466 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 MIR15A-201ENST00000607334 83 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC6.17□□□□□ -1.42
ACTN4O43707 AC034102.8-201ENST00000615146 484 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.17□□□□□ -1.42
ACTN4O43707 AC097372.5-201ENST00000623665 376 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 AC073869.8-201ENST00000641806 335 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
ACTN4O43707 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ACTN4O43707 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ACTN4O43707 BTBD10P1-201ENST00000549824 1352 ntBASIC6.17□□□□□ -1.42
ACTN4O43707 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ACTN4O43707 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
ACTN4O43707 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
ACTN4O43707 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 RNU6-14P-201ENST00000384630 106 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 RPL21P75-201ENST00000396599 483 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 RPL21P28-201ENST00000401418 483 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 Y_RNA.629-201ENST00000411368 105 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 AC079809.1-201ENST00000415468 276 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC6.16□□□□□ -1.42
ACTN4O43707 AL590556.1-201ENST00000423231 483 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 PRDX3P3-201ENST00000447765 522 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 RNU6-1037P-201ENST00000459571 107 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 RPL21P11-201ENST00000461458 483 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 ABCC13-202ENST00000463099 3842 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 RPL21P39-201ENST00000463605 483 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 AC132942.1-201ENST00000486753 483 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 AC093591.1-201ENST00000491435 481 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 RPL21P16-201ENST00000495531 483 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.16□□□□□ -1.42
ACTN4O43707 SNORD116-28-201ENST00000516123 91 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 SNORA43.3-201ENST00000517240 103 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.16□□□□□ -1.42
ACTN4O43707 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 AC027288.2-201ENST00000553028 243 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.16□□□□□ -1.42
ACTN4O43707 RN7SL652P-201ENST00000577769 300 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms