Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.75□□□□□ -1.81
ATP2A1O14983 LSM1P1-201ENST00000438629 273 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.75□□□□□ -1.81
ATP2A1O14983 RPL7P52-201ENST00000449200 742 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.75□□□□□ -1.81
ATP2A1O14983 AC004801.2-202ENST00000463559 283 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AC109486.1-201ENST00000486833 374 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AC022447.3-201ENST00000506865 495 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.75□□□□□ -1.81
ATP2A1O14983 AC006390.1-201ENST00000508068 283 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.75□□□□□ -1.81
ATP2A1O14983 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.75□□□□□ -1.81
ATP2A1O14983 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATP2A1O14983 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.75□□□□□ -1.81
ATP2A1O14983 TGIF1P1-201ENST00000558095 802 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 PCMTD1P2-201ENST00000565017 355 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AC106782.4-201ENST00000568264 210 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.75□□□□□ -1.81
ATP2A1O14983 MIR2682-201ENST00000580305 110 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.75□□□□□ -1.81
ATP2A1O14983 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.75□□□□□ -1.81
ATP2A1O14983 AC010620.1-201ENST00000601088 1102 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AL590229.1-201ENST00000603497 542 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AC112187.2-201ENST00000604345 283 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AL162713.1-201ENST00000604480 262 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AL365503.1-201ENST00000605247 905 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AC055876.5-201ENST00000605667 259 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 AC107214.2-201ENST00000608204 634 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.75□□□□□ -1.81
ATP2A1O14983 AL356266.1-201ENST00000623311 483 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATP2A1O14983 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATP2A1O14983 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATP2A1O14983 AL035425.3-201ENST00000564206 4996 ntBASIC3.75□□□□□ -1.81
ATP2A1O14983 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATP2A1O14983 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.74□□□□□ -1.81
ATP2A1O14983 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.74□□□□□ -1.81
ATP2A1O14983 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AC244517.1-201ENST00000606030 2086 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 RNA5SP258-201ENST00000362750 119 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 Y_RNA.234-201ENST00000364409 97 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATP2A1O14983 SNORA7.4-201ENST00000384249 137 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 MIR607-201ENST00000385241 96 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 SKINT1L-201ENST00000401057 817 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AL021407.1-201ENST00000404531 386 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 MIR1302-8-201ENST00000408342 128 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 RNA5SP229-201ENST00000410809 99 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 TPMTP3-201ENST00000411928 735 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AC007899.1-201ENST00000412776 775 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.74□□□□□ -1.81
ATP2A1O14983 EI24P1-201ENST00000416584 867 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AL159169.1-201ENST00000421119 127 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AC244098.2-201ENST00000422068 99 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 RSU1P2-202ENST00000437884 485 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 MTND2P4-201ENST00000445034 1004 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.74□□□□□ -1.81
ATP2A1O14983 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 ZNF114P1-201ENST00000453500 292 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AC021205.2-201ENST00000480069 347 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATP2A1O14983 HMGB1P36-201ENST00000487709 576 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 OR2A20P-203ENST00000498397 1268 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AC107934.2-201ENST00000518653 310 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AP004247.1-201ENST00000531556 1289 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.74□□□□□ -1.81
ATP2A1O14983 SETP7-201ENST00000552169 453 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATP2A1O14983 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.74□□□□□ -1.81
ATP2A1O14983 PIGPP4-201ENST00000584447 307 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 BNIP3P23-201ENST00000599655 511 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AC004853.1-201ENST00000604902 698 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AC092354.1-201ENST00000606057 376 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AC011816.2-201ENST00000607089 556 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AC097468.3-201ENST00000607956 456 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AC018692.3-201ENST00000623929 123 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 AL049780.3-201ENST00000624612 1583 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATP2A1O14983 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.74□□□□□ -1.81
ATP2A1O14983 AC092447.10-201ENST00000620607 1652 ntBASIC3.74□□□□□ -1.81
ATP2A1O14983 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATP2A1O14983 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms