Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC010378.1-201ENST00000619270 362 ntBASIC3.79□□□□□ -1.8
CUX2O14529 MTCO1P6-201ENST00000481192 1384 ntBASIC3.79□□□□□ -1.8
CUX2O14529 MIR221-201ENST00000385135 110 ntBASIC3.79□□□□□ -1.8
CUX2O14529 RNU2-21P-201ENST00000410368 188 ntBASIC3.79□□□□□ -1.8
CUX2O14529 RNU6-77P-201ENST00000410554 91 ntBASIC3.79□□□□□ -1.8
CUX2O14529 POLR2J4-204ENST00000418424 324 ntBASIC3.79□□□□□ -1.8
CUX2O14529 AC092832.1-201ENST00000422934 400 ntBASIC3.79□□□□□ -1.8
CUX2O14529 MTCO2P1-201ENST00000424648 477 ntBASIC3.79□□□□□ -1.8
CUX2O14529 HMGB1P45-201ENST00000435986 653 ntBASIC3.79□□□□□ -1.8
CUX2O14529 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.79□□□□□ -1.8
CUX2O14529 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.79□□□□□ -1.8
CUX2O14529 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.79□□□□□ -1.8
CUX2O14529 RPL32P14-201ENST00000463196 378 ntBASIC3.79□□□□□ -1.8
CUX2O14529 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.79□□□□□ -1.8
CUX2O14529 SCARNA16.3-201ENST00000516595 184 ntBASIC3.79□□□□□ -1.8
CUX2O14529 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.79□□□□□ -1.8
CUX2O14529 DNAJC19P9-201ENST00000555084 351 ntBASIC3.79□□□□□ -1.8
CUX2O14529 MIR4504-201ENST00000577413 92 ntBASIC3.79□□□□□ -1.8
CUX2O14529 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.79□□□□□ -1.8
CUX2O14529 AL009028.1-201ENST00000604895 802 ntBASIC3.79□□□□□ -1.8
CUX2O14529 AP005229.2-201ENST00000609980 697 ntBASIC3.79□□□□□ -1.8
CUX2O14529 AL589994.2-201ENST00000621124 579 ntBASIC3.79□□□□□ -1.8
CUX2O14529 AC025263.3-201ENST00000622965 1396 ntBASIC3.78□□□□□ -1.8
CUX2O14529 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CUX2O14529 AC097714.1-201ENST00000511272 1647 ntBASIC3.78□□□□□ -1.8
CUX2O14529 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CUX2O14529 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.78□□□□□ -1.8
CUX2O14529 RNU6-356P-201ENST00000384140 107 ntBASIC3.78□□□□□ -1.8
CUX2O14529 EI24P1-201ENST00000416584 867 ntBASIC3.78□□□□□ -1.8
CUX2O14529 ARF4P2-201ENST00000430209 526 ntBASIC3.78□□□□□ -1.8
CUX2O14529 RPS15AP28-201ENST00000435088 386 ntBASIC3.78□□□□□ -1.8
CUX2O14529 RPL23AP33-201ENST00000442301 452 ntBASIC3.78□□□□□ -1.8
CUX2O14529 HMGB3P30-201ENST00000457863 606 ntBASIC3.78□□□□□ -1.8
CUX2O14529 AC146507.1-201ENST00000468335 354 ntBASIC3.78□□□□□ -1.8
CUX2O14529 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CUX2O14529 AC135721.1-201ENST00000497954 479 ntBASIC3.78□□□□□ -1.8
CUX2O14529 MLLT10P2-201ENST00000506434 249 ntBASIC3.78□□□□□ -1.8
CUX2O14529 OR4R2P-201ENST00000530815 597 ntBASIC3.78□□□□□ -1.8
CUX2O14529 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.78□□□□□ -1.8
CUX2O14529 MTND4LP25-201ENST00000570218 163 ntBASIC3.78□□□□□ -1.8
CUX2O14529 AC099778.2-201ENST00000610904 211 ntBASIC3.78□□□□□ -1.8
CUX2O14529 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CUX2O14529 MTND4P8-201ENST00000514997 1362 ntBASIC3.78□□□□□ -1.81
CUX2O14529 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.78□□□□□ -1.81
CUX2O14529 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CUX2O14529 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CUX2O14529 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.77□□□□□ -1.81
CUX2O14529 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.77□□□□□ -1.81
CUX2O14529 RNU6-392P-201ENST00000364926 101 ntBASIC3.77□□□□□ -1.81
CUX2O14529 U6.112-201ENST00000384129 70 ntBASIC3.77□□□□□ -1.81
CUX2O14529 RNU6-328P-201ENST00000390887 106 ntBASIC3.77□□□□□ -1.81
CUX2O14529 SNORD65C-201ENST00000390962 71 ntBASIC3.77□□□□□ -1.81
CUX2O14529 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.77□□□□□ -1.81
CUX2O14529 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.77□□□□□ -1.81
CUX2O14529 HSFY3P-201ENST00000444242 1191 ntBASIC3.77□□□□□ -1.81
CUX2O14529 GXYLT1P1-201ENST00000446657 490 ntBASIC3.77□□□□□ -1.81
CUX2O14529 GTF2IP12-201ENST00000456547 356 ntBASIC3.77□□□□□ -1.81
CUX2O14529 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.77□□□□□ -1.81
CUX2O14529 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.77□□□□□ -1.81
CUX2O14529 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.77□□□□□ -1.81
CUX2O14529 PRELID3BP4-201ENST00000515476 571 ntBASIC3.77□□□□□ -1.81
CUX2O14529 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.77□□□□□ -1.81
CUX2O14529 AC008687.2-201ENST00000597865 520 ntBASIC3.77□□□□□ -1.81
CUX2O14529 MIR6766-201ENST00000622641 72 ntBASIC3.77□□□□□ -1.81
CUX2O14529 AC097372.4-201ENST00000625025 466 ntBASIC3.77□□□□□ -1.81
CUX2O14529 AC068620.4-201ENST00000636730 1182 ntBASIC3.77□□□□□ -1.81
CUX2O14529 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.77□□□□□ -1.81
CUX2O14529 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.76□□□□□ -1.81
CUX2O14529 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.76□□□□□ -1.81
CUX2O14529 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CUX2O14529 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CUX2O14529 RNA5SP190-201ENST00000365222 118 ntBASIC3.76□□□□□ -1.81
CUX2O14529 SNORD6-201ENST00000365444 73 ntBASIC3.76□□□□□ -1.81
CUX2O14529 RNU6-1293P-201ENST00000384077 107 ntBASIC3.76□□□□□ -1.81
CUX2O14529 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.76□□□□□ -1.81
CUX2O14529 RNA5SP239-201ENST00000410218 129 ntBASIC3.76□□□□□ -1.81
CUX2O14529 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.76□□□□□ -1.81
CUX2O14529 AC104332.2-201ENST00000429959 156 ntBASIC3.76□□□□□ -1.81
CUX2O14529 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.76□□□□□ -1.81
CUX2O14529 AL929288.2-201ENST00000446368 407 ntBASIC3.76□□□□□ -1.81
CUX2O14529 AC017099.1-201ENST00000448261 1028 ntBASIC3.76□□□□□ -1.81
CUX2O14529 RPS15AP17-201ENST00000470598 390 ntBASIC3.76□□□□□ -1.81
CUX2O14529 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.76□□□□□ -1.81
CUX2O14529 LTV1P1-201ENST00000510683 1237 ntBASIC3.76□□□□□ -1.81
CUX2O14529 RNU4-60P-201ENST00000517239 135 ntBASIC3.76□□□□□ -1.81
CUX2O14529 AF279873.1-201ENST00000523393 313 ntBASIC3.76□□□□□ -1.81
CUX2O14529 AC023824.3-201ENST00000569003 562 ntBASIC3.76□□□□□ -1.81
CUX2O14529 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.76□□□□□ -1.81
CUX2O14529 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.76□□□□□ -1.81
CUX2O14529 AL160237.3-201ENST00000604114 1013 ntBASIC3.76□□□□□ -1.81
CUX2O14529 RNU6-156P-201ENST00000621869 107 ntBASIC3.76□□□□□ -1.81
CUX2O14529 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.76□□□□□ -1.81
CUX2O14529 AL356266.1-201ENST00000623311 483 ntBASIC3.76□□□□□ -1.81
CUX2O14529 AL590396.4-201ENST00000636779 956 ntBASIC3.76□□□□□ -1.81
CUX2O14529 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.76□□□□□ -1.81
CUX2O14529 RNY1-201ENST00000364228 113 ntBASIC3.75□□□□□ -1.81
CUX2O14529 DSTNP4-201ENST00000399472 474 ntBASIC3.75□□□□□ -1.81
CUX2O14529 RNU2-68P-201ENST00000410878 191 ntBASIC3.75□□□□□ -1.81
CUX2O14529 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.75□□□□□ -1.81
CUX2O14529 OR51AB1P-201ENST00000429046 620 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms